RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 NEUROD4Q9HD90 331 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 ACSS1Q9NUB1 689 aaPredicted RBP18.94■□□□□ 0.62
VSX1-201ENST00000376707 KLHL28Q9NXS3 571 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 ZNF226Q9NYT6 803 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 VDAC3Q9Y277 283 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 ABCA4P78363 2273 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 NF1P21359 2839 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 A0A1W2PPR1 153 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 SHISA8B8ZZ34 492 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 ALG1L2C9J202 215 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 PIP5K1BO14986 540 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 NDUFB5O43674 189 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 FCGR2AP12318 317 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 POU2F1P14859 743 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 CREB1P16220 341 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 ARRB2P32121 409 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 MAP3K8P41279 467 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 OCRLQ01968 901 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 XKR7Q5GH72 579 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 PPP4R4Q6NUP7 873 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 ZNF474Q6S9Z5 364 aaPredicted RBP18.93■□□□□ 0.62
VSX1-201ENST00000376707 ZCCHC23Q6ZST2 131 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 MED12LQ86YW9 2145 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 METTL25Q8N6Q8 603 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 OR4C3Q8NH37 302 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 WFIKKN1Q96NZ8 548 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 MED18Q9BUE0 208 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 ELOVL5Q9NYP7 299 aa18.93■□□□□ 0.62
VSX1-201ENST00000376707 C6orf203Q9P0P8 240 aaPredicted RBP18.93■□□□□ 0.62
VSX1-201ENST00000376707 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 UQCRHLA0A096LP55 91 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 ZNF500O60304 480 aaPredicted RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 OXSR1O95747 527 aaPredicted RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 CD8BP10966 210 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 ACP2P11117 423 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 BCKDHAP12694 445 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 HPGDP15428 266 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 DDX5P17844 614 aaKnown RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 CD53P19397 219 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 ETV4P43268 484 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 TMEM44Q2T9K0 475 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 MFSD12Q6NUT3 480 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 FIGNL1Q6PIW4 674 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 R3HCC1LQ7Z5L2 792 aaKnown RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 GATSQ8NAP1 163 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 JADE3Q92613 823 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 GIMAP5Q96F15 307 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 PPP3R2Q96LZ3 170 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 PRRG4Q9BZD6 226 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 BEX4Q9NWD9 120 aaPredicted RBP18.92■□□□□ 0.62
VSX1-201ENST00000376707 PROCRQ9UNN8 238 aa18.92■□□□□ 0.62
VSX1-201ENST00000376707 A0A087WZY1 265 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 TMEM114B3SHH9 223 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 KCNK2O95069 426 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 CGAP01215 116 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 BPGMP07738 259 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 NGFRP08138 427 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 ALOX5P09917 674 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 FOSL1P15407 271 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 ZNF17P17021 662 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 TBXA2RP21731 343 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 UGT2B10P36537 528 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 HPCAL1P37235 193 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 EIF1AXP47813 144 aaKnown RBP18.91■□□□□ 0.62
VSX1-201ENST00000376707 DUSP5Q16690 384 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.91■□□□□ 0.62
VSX1-201ENST00000376707 LRIG3Q6UXM1 1119 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 FAM214BQ7L5A3 538 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 GGNQ86UU5 652 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 COX18Q8N8Q8 333 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 WFDC11Q8NEX6 87 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 DLL4Q9NR61 685 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 ATP6V1HQ9UI12 483 aa18.91■□□□□ 0.62
VSX1-201ENST00000376707 C16orf97H3BN30 126 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 SCDO00767 359 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 AQP8O94778 261 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 EFNA1P20827 205 aaPredicted RBP18.9■□□□□ 0.62
VSX1-201ENST00000376707 MAPK1P28482 360 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 LCN1P31025 176 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 SERPINB4P48594 390 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 PRIM2P49643 509 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 ZNF41P51814 821 aaPredicted RBP18.9■□□□□ 0.62
VSX1-201ENST00000376707 MLC1Q15049 377 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 ZCCHC12Q6PEW1 402 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 WDR75Q8IWA0 830 aaKnown RBP18.9■□□□□ 0.62
VSX1-201ENST00000376707 ZNF610Q8N9Z0 462 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 FAM110BQ8TC76 370 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 OTUB1Q96FW1 271 aaPredicted RBP18.9■□□□□ 0.62
VSX1-201ENST00000376707 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 C16orf58Q96GQ5 468 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 POM121Q96HA1 1249 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 UBQLN4Q9NRR5 601 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 ZCCHC3Q9NUD5 404 aaKnown RBP18.9■□□□□ 0.62
VSX1-201ENST00000376707 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.9■□□□□ 0.62
VSX1-201ENST00000376707 ZDHHC2Q9UIJ5 367 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 EMC9Q9Y3B6 208 aa18.9■□□□□ 0.62
VSX1-201ENST00000376707 V9GYY5 206 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms