RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CBLCQ9ULV8 474 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 TEX51A0A1B0GUA7 166 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 LNP1A1A4G5 178 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 EFCAB7A8K855 629 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 ADAP00813 363 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 SYPP08247 313 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 ZNF28P17035 718 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 TUBA4AP68366 448 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 ACY1Q03154 408 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-206ENST00000376496 NRMQ8IXM6 262 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 PARP8Q8N3A8 854 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 NAA50Q9GZZ1 169 aaKnown RBP11.64□□□□□ -0.55
CLCN6-206ENST00000376496 MGAT4BQ9UQ53 548 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
CLCN6-206ENST00000376496 TCRBV16S1A1N1A0A5B0 115 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 BLACEA4D250 179 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 TRIM64CA6NLI5 447 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 THBS1P07996 1170 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ST13P50502 369 aaKnown RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 MLLT10P55197 1068 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SMIM11AP58511 58 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 RAB39AQ14964 217 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 TRAM2Q15035 370 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SF3A2Q15428 464 aaKnown RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 NKAIN1Q4KMZ8 207 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 RHBDD2Q6NTF9 364 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 QSOX2Q6ZRP7 698 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 MED25Q71SY5 747 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 HEATR5AQ86XA9 2040 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 KIF18BQ86Y91 864 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SLITRK4Q8IW52 837 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ZNF540Q8NDQ6 660 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ZNF721Q8TF20 911 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SLC38A4Q969I6 547 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 PSD2Q9BQI7 771 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 FAM192AQ9GZU8 254 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 IMPAD1Q9NX62 359 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 D6RAR5 112 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 CNOT3O75175 753 aaKnown RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 OSMP13725 252 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ST3GAL3Q11203 375 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SQSTM1Q13501 440 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 OR1Q1Q15612 314 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 CLEC12AQ5QGZ9 265 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 BROXQ5VW32 411 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 XAF1Q6GPH4 301 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 CCDC81Q6ZN84 652 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 RHBDD1Q8TEB9 315 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 THAP3Q8WTV1 239 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 KLHDC3Q9BQ90 382 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 SIDT1Q9NXL6 827 aaKnown RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 RALGAPA1Q6GYQ0 2036 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 TOX3O15405 576 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 YKT6O15498 198 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 OXSR1O95747 527 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ZGLP1P0C6A0 271 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 MSL3P1P0C860 447 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 HOXD12P35452 270 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 CLVS1Q8IUQ0 354 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 C9orf40Q8IXQ3 194 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 PFN4Q8NHR9 129 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 NODALQ96S42 347 aa11.63□□□□□ -0.55
CLCN6-206ENST00000376496 YTHDF1Q9BYJ9 559 aaKnown RBP11.63□□□□□ -0.55
CLCN6-206ENST00000376496 ARRDC5A6NEK1 342 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 KHNYNO15037 678 aaKnown RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 OIP5O43482 229 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 ABCB7O75027 752 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 MT-ND2P03891 347 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 OCA2Q04671 838 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 EIPR1Q53HC9 387 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 RRM2BQ7LG56 351 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 PPP1R3BQ86XI6 285 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 APLFQ8IW19 511 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 RHOXF1Q8NHV9 184 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 C8orf44Q96CB5 159 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 PRSS27Q9BQR3 290 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 MKKSQ9NPJ1 570 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 ATP13A2Q9NQ11 1180 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 GPR83Q9NYM4 423 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 SMIM31A0A1B0GVY4 71 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 PMS2P1A4D2B8 440 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 TMX2-CTNND1H3BSU7 103 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 INMTO95050 263 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 FADS2O95864 444 aaKnown RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 AK1P00568 194 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 IGKV3-11P04433 115 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 NR4A1P22736 598 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 NR0B1P51843 470 aaKnown RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 NUP107P57740 925 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 ELAVL1Q15717 326 aaKnown RBP11.62□□□□□ -0.55
CLCN6-206ENST00000376496 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 ACSM5Q6NUN0 579 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 C1orf94Q6P1W5 598 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 GPR141Q7Z602 305 aa11.62□□□□□ -0.55
CLCN6-206ENST00000376496 RANBP3LQ86VV4 465 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms