RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FAM26DQ5JW98 314 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PAQR6Q6TCH4 344 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 C6orf120Q7Z4R8 191 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GABRG1Q8N1C3 465 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 OR4F15Q8NGB8 312 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FEZF2Q8TBJ5 459 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF512BQ96KM6 892 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 JSRP1Q96MG2 331 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CCM2Q9BSQ5 444 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MECRQ9BV79 373 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 NAGPAQ9UK23 515 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FZD1Q9UP38 647 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KIF20BQ96Q89 1820 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CASKIN1Q8WXD9 1431 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SYT7O43581 403 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GADD45GO95257 159 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ANXA4P09525 319 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF888P0CJ79 500 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 EDNRBP24530 442 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 OR2B8PP59922 312 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TGFBR3Q03167 851 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SRSF4Q08170 494 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 DOC2BQ14184 412 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KCNJ11Q14654 390 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 EIF4HQ15056 248 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CTSL3PQ5NE16 218 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SLFN11Q7Z7L1 901 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RLN3Q8WXF3 142 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ISG20Q96AZ6 181 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SLC39A13Q96H72 371 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GPR87Q9BY21 358 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 DUSP16Q9BY84 665 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TXLNGYQ9BZA5 131 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 DDX31Q9H8H2 851 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SEMA4BQ9NPR2 832 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TBX20Q9UMR3 447 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PSG11Q9UQ72 335 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SLC22A7Q9Y694 548 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SNAPC4Q5SXM2 1469 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ERBB4Q15303 1308 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RBAK-RBAKDNI3L0D1 243 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 J3QLW9 94 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 J3QRK9 145 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RAF1P04049 648 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 AMY2AP04746 511 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF19P17023 458 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 AQP1P29972 269 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GABRA3P34903 492 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF143P52747 638 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TSTQ16762 297 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PRAMEF18Q5VWM3 479 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RTL6Q6ICC9 239 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SBSNQ6UWP8 590 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 THNSL2Q86YJ6 484 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 OR1S2Q8NGQ3 325 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SLC2A12Q8TD20 617 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 OIT3Q8WWZ8 545 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FBXL8Q96CD0 374 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZBED6CLQ96FA7 236 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TRMOQ9BU70 441 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 C9orf84Q5VXU9 1444 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ABCD4O14678 606 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CLDN1O95832 211 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 APBA3O96018 575 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 LRG1P02750 347 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PTGER4P35408 488 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GZMKP49863 264 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 DGKZQ13574 1117 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ATP6AP1Q15904 470 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TP53I3Q53FA7 332 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SLX4IPQ5VYV7 408 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PM20D1Q6GTS8 502 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KIAA1211LQ6NV74 962 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 JMJD6Q6NYC1 403 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SHFQ7M4L6 423 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SGMS1Q86VZ5 419 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SULF2Q8IWU5 870 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CELF5Q8N6W0 485 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 HJURPQ8NCD3 748 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RAET1EQ8TD07 263 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ATG4CQ96DT6 458 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FAM20AQ96MK3 541 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MAP1LC3CQ9BXW4 147 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 NMES1Q9C002 83 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 NSD3Q9BZ95 1437 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PNMA6EA0A0J9YXQ4 647 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 TRIM77I1YAP6 450 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CD80P33681 288 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 DLX5P56178 289 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 EEFSECP57772 596 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 HLA-BQ31612 363 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SIGIRRQ6IA17 410 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ACOT7LQ6ZUV0 252 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF572Q7Z3I7 529 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms