RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CACNG1Q06432 222 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 ILKQ13418 452 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 GANABQ14697 944 aaKnown RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 CPSF6Q16630 551 aaKnown RBP eCLIP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 Q3ZCU0 254 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 CCDC157Q569K6 752 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 HAGHLQ6PII5 290 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 UNC5DQ6UXZ4 953 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 C12orf45Q8N5I9 185 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-203ENST00000375315 LMNTD1Q8N9Z9 388 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 SFT2D1Q8WV19 159 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
C9orf3-203ENST00000375315 PIKFYVEQ9Y2I7 2098 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TMEM129A0AVI4 362 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 IRGMA1A4Y4 181 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TRABD2BA6NFA1 517 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GAPDHSO14556 408 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SOCS5O75159 536 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PDYNP01213 254 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GAAP10253 952 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF7P17097 686 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PVALBP20472 110 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CHI3L1P36222 383 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 OPRD1P41143 372 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 MAPK8P45983 427 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 XCR1P46094 333 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 LIMS1P48059 325 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 RFX3P48380 749 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GK2Q14410 553 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 C12orf73Q69YU5 71 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PYHIN1Q6K0P9 492 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 Q7L0L9 218 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 BCDIN3DQ7Z5W3 292 aaKnown RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GPR135Q8IZ08 494 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CLECL1Q8IZS7 167 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 OR1S1Q8NH92 325 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CMTM7Q96FZ5 175 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 APOLD1Q96LR9 279 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 HHIPQ96QV1 700 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GDE1Q9NZC3 331 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 DTX4Q9Y2E6 619 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 DSPPQ9NZW4 1301 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 DOCK9Q9BZ29 2069 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 K7ESM1 405 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 LRRTM2O43300 516 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SOX14O95416 240 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CLDN9O95484 217 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TFPIP10646 304 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 S100A11P31949 105 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 XKP51811 444 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 LGALS3BPQ08380 585 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 HLXQ14774 488 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 RGNQ15493 299 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SMAD2Q15796 467 aaKnown RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 C5orf46Q6UWT4 87 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TMEM17Q86X19 198 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SYT12Q8IV01 421 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 LILRA3Q8N6C8 439 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CNOT9Q92600 299 aaKnown RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 C7orf50Q9BRJ6 194 aaKnown RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 RNF32Q9H0A6 362 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 EPHA6Q9UF33 1036 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PCOLCE2Q9UKZ9 415 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CHURC1-FNTBB4DL54 471 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PRMT3O60678 531 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PPP3CBP16298 524 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 LTBRP36941 435 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 POLR2LP62875 67 aaKnown RBP11.38□□□□□ -0.59
C9orf3-203ENST00000375315 PDGFRLQ15198 375 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GAB4Q2WGN9 574 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SFRP5Q5T4F7 317 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 CEACAM20Q6UY09 585 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 IKBIPQ70UQ0 350 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 ETFBKMTQ8IXQ9 262 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TMIEQ8NEW7 156 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 VOPP1Q96AW1 172 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 TBC1D17Q9HA65 648 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 BEX1Q9HBH7 125 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 SEMA3GQ9NS98 782 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 DZANK1Q9NVP4 752 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 MED11Q9P086 117 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 RPS6KB2Q9UBS0 482 aa11.38□□□□□ -0.59
C9orf3-203ENST00000375315 GCM2O75603 506 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 RFC3P40938 356 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 CCR6P51684 374 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 RAB8AP61006 207 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 HES5Q5TA89 166 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ARRDC3Q96B67 414 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TMED9Q9BVK6 235 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 SEMA4CQ9C0C4 833 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 CHST8Q9H2A9 424 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TVP23BQ9NYZ1 205 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 DHRS7Q9Y394 339 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ENPP4Q9Y6X5 453 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms