RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ELFN1P0C7U0 828 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 BEX3Q00994 111 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 GPR176Q14439 515 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 NETO2Q8NC67 525 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 PROKR1Q8TCW9 393 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 PDXPQ96GD0 296 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 TMEM74Q96NL1 305 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 CASD1Q96PB1 797 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 FDXACB1Q9BRP7 624 aaPredicted RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 CREBZFQ9NS37 354 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 RPH3ALQ9UNE2 315 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SLC7A11Q9UPY5 501 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SAMD9Q5K651 1589 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 LACTBL1A8MY62 500 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 B4DXG7 233 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SMAD9O15198 467 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 BUD23O43709 281 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 SERPINA5P05154 406 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 BMP5P22003 454 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 HRH2P25021 359 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 PRDX3P30048 256 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 MC4RP32245 332 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 THBS2P35442 1172 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 MDH2P40926 338 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 PAFAH1B2P68402 229 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 PSPHP78330 225 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 MSMO1Q15800 293 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SHEQ5VZ18 495 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SIAH3Q8IW03 269 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SUMF1Q8NBK3 374 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 BPIFCQ8NFQ6 507 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 OR4F15Q8NGB8 312 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 OR13C8Q8NGS7 320 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 IMP4Q96G21 291 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 FAM163AQ96GL9 167 aaPredicted RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 BTN2A3PQ96KV6 586 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 FBXL2Q9UKC9 423 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 NPEPPSL1A6NEC2 478 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 DBX1A6NMT0 343 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 AK1P00568 194 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 C4BPAP04003 597 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 CXCR1P25024 350 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 PPA1Q15181 289 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 RNF113BQ8IZP6 322 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 SPICQ8N5J4 248 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 ARSGQ96EG1 525 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 ZNF75AQ96N20 296 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 CTDSP1Q9GZU7 261 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 MYOTQ9UBF9 498 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 TP53I11O14683 189 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SPATA31D3P0C874 917 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 CRABP1P29762 137 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 EFEMP1Q12805 493 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 CPZQ66K79 652 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 FBXL19Q6PCT2 694 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SPATA31D4Q6ZUB0 917 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 A0A0A6YYJ9 748 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 ADH5P11766 374 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 PNRC1Q12796 327 aaPredicted RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 TMPPEQ6ZT21 453 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 SRA1Q9HD15 236 aaKnown RBP6.27□□□□□ -1.41
UBR4-204ENST00000375254 AAASQ9NRG9 546 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 WDR7Q9Y4E6 1490 aa6.27□□□□□ -1.41
UBR4-204ENST00000375254 MEIS3P1A6NDR6 274 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 GABRB1P18505 474 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CD82P27701 267 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 OR4K2Q8NGD2 314 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 GPRC5CQ9NQ84 441 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 ZNF726A6NNF4 738 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CLDN11O75508 207 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CKMP06732 381 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CBR1P16152 277 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 MEP1BQ16820 701 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 GAL3ST4Q96RP7 486 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 TMED3Q9Y3Q3 217 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 OR4F21O95013 312 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 RPE65Q16518 533 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 TMEM145Q8NBT3 493 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 FAM71CQ8NEG0 241 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
UBR4-204ENST00000375254 FYTTD1Q96QD9 318 aaKnown RBP6.26□□□□□ -1.41
UBR4-204ENST00000375254 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CCSO14618 274 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 SEPT4O43236 478 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 ERAL1O75616 437 aaKnown RBP6.26□□□□□ -1.41
UBR4-204ENST00000375254 ABHD16AO95870 558 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 GLUD1P00367 558 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 NMBRP28336 390 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 NAA10P41227 235 aaPredicted RBP6.26□□□□□ -1.41
UBR4-204ENST00000375254 ZP2Q05996 745 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 C6orf120Q7Z4R8 191 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 CELF2-AS1Q8N7Q2 184 aa6.26□□□□□ -1.41
UBR4-204ENST00000375254 KCTD13Q8WZ19 329 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms