RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CPNE5Q9HCH3 593 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 ACTR10Q9NZ32 417 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SRPK3Q9UPE1 567 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 ZNF736B4DX44 427 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 PRAMEF26H0Y7S4 382 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TP53P04637 393 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 DCNP07585 359 aaKnown RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 NFATC3Q12968 1075 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CAMK2DQ13557 499 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 DEFB110Q30KQ9 67 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 OR9A2Q8NGT5 310 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 FNDC9Q8TBE3 224 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CCNL2Q96S94 520 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TPSD1Q9BZJ3 242 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CUTCQ9NTM9 273 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TMX2-CTNND1H3BSU7 103 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SDC3O75056 442 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 STT3AP46977 705 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 NR0B2Q15466 257 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 PDZD3Q86UT5 571 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 GPR150Q8NGU9 434 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 PRRT1Q99946 306 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 ST6GALNAC5Q9BVH7 336 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 GPR160Q9UJ42 338 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 F5H5K5 113 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 SULT2B1O00204 365 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 DRD1P21728 446 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CHATP28329 748 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 VIPR2P41587 438 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 EMP2P54851 167 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CPZQ66K79 652 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 PRR18Q8N4B5 295 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 NKX2-4Q9H2Z4 354 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 SLA2Q9H6Q3 261 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 SRPX2O60687 465 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 CSNK1A1P48729 337 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CX3CR1P49238 355 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR5L1Q8NGL2 311 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR51Q1Q8NH59 317 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 NPRL2Q8WTW4 380 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 FRS2Q8WU20 508 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 ZMYND19Q96E35 227 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 INTS14Q96SY0 518 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CPEB1Q9BZB8 566 aaKnown RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 DMRT3Q9NQL9 472 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 THSD1Q9NS62 852 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 GAAP10253 952 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 RAB4AP20338 218 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 DRD5P21918 477 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 MC3RP41968 323 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 NKX6-1P78426 367 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 MAP4K2Q12851 820 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 SLC6A19Q695T7 634 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 FCRLBQ6BAA4 426 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR5D14Q8NGL3 314 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 LMF2Q9BU23 707 aaKnown RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 APOOQ9BUR5 198 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 LHPPQ9H008 270 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 GCM1Q9NP62 436 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 H3BML4 177 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 LILRB3O75022 631 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 GLSO94925 669 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 EGFP01133 1207 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CTSAP10619 480 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 ARG2P78540 354 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 ELP2Q6IA86 826 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 BEST4Q8NFU0 473 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR4K15Q8NH41 348 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 INPP5KQ9BT40 448 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 PRMT8Q9NR22 394 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 RHBDD3Q9Y3P4 386 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 DCDC2BA2VCK2 349 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 M0R3H8 397 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 FOXE1O00358 373 aaPredicted RBP10.88□□□□□ -0.67
VCL-202ENST00000372755 SEC14L2O76054 403 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 SLC34A2O95436 690 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CD79BP40259 229 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 AGAP7PQ5VUJ5 663 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 AGAP6Q5VW22 663 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR5AR1Q8NGP9 310 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 OR2T35Q8NGX2 323 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 AGAP4Q96P64 663 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 INIPQ9NRY2 104 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 CNIH4Q9P003 139 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 POLHQ9Y253 713 aa10.88□□□□□ -0.67
VCL-202ENST00000372755 A0A087WUU8 490 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 NME4O00746 187 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 GMDSO60547 372 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 POU3F2P20265 443 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms