RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.87
COL5A1-202ENST00000371820 MYO9AB2RTY4 2548 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 EFCAB10A6NFE3 127 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 CLCA1A8K7I4 914 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 E9PQ18 207 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 MASP2O00187 686 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 GALR3O60755 368 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 TBX19O60806 448 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 RDH16O75452 317 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 PDE9AO76083 593 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 SNX4O95219 450 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 DDAH2O95865 285 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 C1GALT1C1LP0DN25 315 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 PRKACGP22612 351 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 SOX6P35712 828 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 GGT2P36268 569 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 CLK3P49761 638 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ARG2P78540 354 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 IL1RL1Q01638 556 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 DOC2AQ14183 400 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF169Q14929 603 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 OXA1LQ15070 435 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 RGNQ15493 299 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 TBCEQ15813 527 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 EXT1Q16394 746 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ZXDCQ2QGD7 858 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 EIF2S3LQ2VIR3 472 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 PLEKHN1Q494U1 663 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ABHD17BQ5VST6 288 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 TMIGD1Q6UXZ0 262 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 CPEB2Q7Z5Q1 589 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 IGFN1Q86VF2 1251 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 CYP4Z1Q86W10 505 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 SLC44A2Q8IWA5 706 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF740Q8NDX6 193 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 RHOXF1Q8NHV9 184 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 DYNC2LI1Q8TCX1 351 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ZFP90Q8TF47 636 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 SNRNP40Q96DI7 357 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 ZHX1-C8orf76Q96EF9 292 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 HSH2DQ96JZ2 352 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 LPAR4Q99677 370 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 MACROD1Q9BQ69 325 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 INPP5KQ9BT40 448 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 VN1R1Q9GZP7 353 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 NAA50Q9GZZ1 169 aaKnown RBP9.64□□□□□ -0.87
COL5A1-202ENST00000371820 AKIP1Q9NQ31 210 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 DAPK2Q9UIK4 370 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 MKLN1Q9UL63 735 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
COL5A1-202ENST00000371820 A1L4Q6 167 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 SYNDIG1LA6NDD5 238 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TMEM247A6NEH6 219 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ANKDD1BA6NHY2 528 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 GABRR3A8MPY1 467 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 INMTO95050 263 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 OXSR1O95747 527 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 FHP07954 510 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF888P0CJ79 500 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PSMB9P28065 219 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TIA1P31483 386 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PIGAP37287 484 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TSFMP43897 325 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ANXA11P50995 505 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 NEK2P51955 445 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 IST1P53990 364 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 WNT3P56703 355 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 DEFA1P59665 94 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 DEFA3P59666 94 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 CDC42P60953 191 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TGM3Q08188 693 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF763Q0D2J5 394 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 Q0VFX4 171 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 SLBPQ14493 270 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PCOLCEQ15113 449 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 INAQ16352 499 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 MICAQ29983 383 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 DEFB134Q4QY38 66 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 GCNT6Q5T4J0 391 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PLAG1Q6DJT9 500 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 RPUSD3Q6P087 351 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 LINC00696Q6ZRV3 163 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PRSS41Q7RTY9 318 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TMEM179BQ7Z7N9 219 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 LAS2Q8IYD9 372 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 FAM86B1Q8N7N1 296 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PLPP5Q8NEB5 264 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 CLHC1Q8NHS4 586 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 SUN3Q8TAQ9 357 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 BRIX1Q8TDN6 353 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ADAMTS18Q8TE60 1221 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 UTP15Q8TED0 518 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 GEMIN6Q8WXD5 167 aaKnown RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 NR4A3Q92570 626 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TANKQ92844 425 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 GAL3ST3Q96A11 431 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms