RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TRHRP34981 398 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 CEACAM7Q14002 265 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ADIRFQ15847 76 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TMPPEQ6ZT21 453 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TECPR1Q7Z6L1 1165 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 C14orf80Q86SX3 495 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 OR1M1Q8NGA1 313 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 PCNPQ8WW12 178 aaKnown RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 HHIPL1Q96JK4 782 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 GLB1L2Q8IW92 636 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 FGFBP2Q9BYJ0 223 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 LDAHQ9H6V9 325 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 FBRSL1Q9HCM7 1045 aaKnown RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SERPINA5P05154 406 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 HLA-DMAP28067 261 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM31Q5JXX7 168 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 NCBP2-AS2Q69YL0 99 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 OR8U1Q8NH10 309 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 NRG4Q8WWG1 115 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 LRFN5Q96NI6 719 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 OR51B5Q9H339 312 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 RAB5AP20339 215 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 POU3F4P49335 361 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 STC1P52823 247 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 ACTR1AP61163 376 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 GRB7Q14451 532 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 B3GLCTQ6Y288 498 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 C15orf52Q6ZUT6 534 aaKnown RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 PDCD1LG2Q9BQ51 273 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 C20orf24Q9BUV8 137 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 SUCNR1Q9BXA5 334 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 MDC1Q14676 2089 aaKnown RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 YKT6O15498 198 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 KDELR3O43731 214 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM225BP0DP42 221 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF8P17098 575 aaPredicted RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 CRHBPP24387 322 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 MFGE8Q08431 387 aaPredicted RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 CCINQ13939 588 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 KCNRGQ8N5I3 272 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 GPR148Q8TDV2 347 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 MIB2Q96AX9 1013 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 SPATA31C2B4DYI2 1134 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 SURF4O15260 269 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 CLEC3AO75596 197 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 THBS1P07996 1170 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 F7P08709 466 aaPredicted RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 ADORA3P0DMS8 318 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 FCER1GP30273 86 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 SLC39A9Q9NUM3 307 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 DKKL1Q9UK85 242 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 UBIAD1Q9Y5Z9 338 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 CLDN24A6NM45 220 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 ANKRD66B4E2M5 251 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 C17orf112F2Z3M2 114 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 LRRC73Q5JTD7 316 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TAC4Q86UU9 113 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 NUP43Q8NFH3 380 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM18Q96B42 140 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TEPSINQ96N21 525 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 POLLQ9UGP5 575 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 SERPINA2P20848 420 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 NDUFV1P49821 464 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 RAB40BQ12829 278 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 RCAN2Q14206 197 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 TFAP2BQ92481 460 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 KCTD12Q96CX2 325 aaKnown RBP14.47□□□□□ -0.09
COL5A1-201ENST00000371817 FOLR1P15328 257 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 KANSL1Q7Z3B3 1105 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 NR2E3Q9Y5X4 410 aa14.47□□□□□ -0.09
COL5A1-201ENST00000371817 CD163L1Q9NR16 1453 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 LIPCP11150 499 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF266Q14584 549 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 TRAPPC6BQ86SZ2 158 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OR7D2Q96RA2 312 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 STYXL1Q9Y6J8 313 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 V9GY05 133 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 MROH2AA6NES4 1674 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 SMLR1H3BR10 107 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 GABRA5P31644 462 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF704Q6ZNC4 412 aaPredicted RBP14.46□□□□□ -0.09
COL5A1-201ENST00000371817 GIMAP2Q9UG22 337 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OARD1Q9Y530 152 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 PPLO60437 1756 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 AGXTP21549 392 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 NME2P22392 152 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 TNFRSF17Q02223 184 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OC90Q02509 493 aaPredicted RBP14.46□□□□□ -0.09
COL5A1-201ENST00000371817 HTR4Q13639 388 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OGFOD3Q6PK18 319 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 LRRTM4Q86VH4 590 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OR6V1Q8N148 313 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OR4K15Q8NH41 348 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 HSD3B7Q9H2F3 369 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 IL1R2P27930 398 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 ACTR1BP42025 376 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 PSMB3P49720 205 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 OR2B8PP59922 312 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 TAF9Q16594 264 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 IGSF11Q5DX21 431 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms