RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MAP4K2Q12851 820 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 DNASE1L3Q13609 305 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 MICAQ29983 383 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 VRK3Q8IV63 474 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 LAS2Q8IYD9 372 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 FGF14Q92915 247 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 SLC30A2Q9BRI3 323 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 ZNF442Q9H7R0 627 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 NOP16Q9Y3C1 178 aaKnown RBP13.83□□□□□ -0.2
NDC1-201ENST00000371429 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 POM121BA6NF01 834 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 LSM1O15116 133 aaKnown RBP13.83□□□□□ -0.2
NDC1-201ENST00000371429 ZNF12P17014 697 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 HOXB9P17482 250 aaPredicted RBP13.83□□□□□ -0.2
NDC1-201ENST00000371429 GCH1P30793 250 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 APLNRP35414 380 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 CSNK1A1P48729 337 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 FXYD6P3P58550 94 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 KCNJ10P78508 379 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 PIGFQ07326 219 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 HENMT1Q5T8I9 393 aaKnown RBP13.83□□□□□ -0.2
NDC1-201ENST00000371429 LRRN1Q6UXK5 716 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 MS4A15Q8N5U1 240 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 SLC30A3Q99726 388 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 CMAHPQ9Y471 501 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 J3QRK9 145 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 IDUAP35475 653 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 FASLGP48023 281 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 CPOQ8IVL8 374 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 INO80EQ8NBZ0 244 aaPredicted RBP13.83□□□□□ -0.2
NDC1-201ENST00000371429 EMC3Q9P0I2 261 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 PFDN2Q9UHV9 154 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 PMF1-BGLAPU3KQ54 211 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 TJP1Q07157 1748 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 SHISA7A6NL88 538 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 LRRN3E7EW58 273 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MECP2P51608 486 aaKnown RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 GLO1Q04760 184 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MELKQ14680 651 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 SLC5A12Q1EHB4 618 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 GGTA1PQ4G0N0 100 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 FCRLBQ6BAA4 426 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 LINC00696Q6ZRV3 163 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 DNAAF1Q8NEP3 725 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 LRRN3Q9H3W5 708 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 PARPBPQ9NWS1 579 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 SLCO2B1O94956 709 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 BMP1P13497 986 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CTGFP29279 349 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 SSR4P51571 173 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 HBA1P69905 142 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 C3orf33Q6P1S2 294 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MMP21Q8N119 569 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 ENDOVQ8N8Q3 282 aaKnown RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 ANKK1Q8NFD2 765 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CCDC120Q96HB5 630 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CLMPQ9H6B4 373 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 KIR3DX1Q9H7L2 352 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 ARMC1Q9NVT9 282 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 ABCD2Q9UBJ2 740 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CARD8Q9Y2G2 431 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MAST2Q6P0Q8 1798 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 LOC102723532A0A0G2JNH3 316 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 F5H5K5 113 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 DLGAP1O14490 977 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 YY2O15391 372 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 MITFO75030 526 aaPredicted RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 AP2S1P53680 142 aaPredicted RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 WBP2NLQ6ICG8 309 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 BEND4Q6ZU67 534 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 IGFN1Q86VF2 1251 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 TSPYL5Q86VY4 417 aaPredicted RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 ZFP41Q8N8Y5 198 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 ABHD5Q8WTS1 349 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 INIPQ9NRY2 104 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 SPHK1Q9NYA1 384 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 PLEK2Q9NYT0 353 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 EXTL2Q9UBQ6 330 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 INTS6Q9UL03 887 aaKnown RBP13.82□□□□□ -0.2
NDC1-201ENST00000371429 KCNS2Q9ULS6 477 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 CDK10Q15131 360 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 SYPL1Q16563 259 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 PRAMEF20Q5VT98 475 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 GARNL3Q5VVW2 1013 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 BPIFA2Q96DR5 249 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 PRRC1Q96M27 445 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 ENKD1Q9H0I2 346 aa13.82□□□□□ -0.2
NDC1-201ENST00000371429 K7ESM1 405 aa13.81□□□□□ -0.2
NDC1-201ENST00000371429 TMEM225BP0DP42 221 aa13.81□□□□□ -0.2
NDC1-201ENST00000371429 CCR2P41597 374 aa13.81□□□□□ -0.2
NDC1-201ENST00000371429 GRAMD2AQ8IUY3 354 aa13.81□□□□□ -0.2
NDC1-201ENST00000371429 ZNF584Q8IVC4 421 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms