RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 KLHL9Q9P2J3 617 aa11.15□□□□□ -0.62
DEPDC1-201ENST00000370966 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
DEPDC1-201ENST00000370966 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 FCER2P06734 321 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 CPMP14384 443 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 SOX3P41225 446 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ERVFC1P60507 584 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 HERV-K104P61576 105 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 YPEL5P62699 121 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 PGGHGQ32M88 737 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 GXYLT1Q4G148 440 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 DCDC5Q6ZRR9 648 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF761Q86XN6 746 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MCATQ8IVS2 390 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TIGD4Q8IY51 512 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 OR13F1Q8NGS4 319 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 OR5AK2Q8NH90 309 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC38A5Q8WUX1 472 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 C19orf43Q9BQ61 176 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 NAA11Q9BSU3 229 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MS4A8Q9BY19 250 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TPSD1Q9BZJ3 242 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 PDFQ9HBH1 243 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 CPNE7Q9UBL6 633 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 KCNIP3Q9Y2W7 256 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 NUP205Q92621 2012 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 KIAA1551Q9HCM1 1747 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 A0A0A6YYC8 382 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 I3L1I5 382 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 PET100P0DJ07 73 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 FXYD6P3P58550 94 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 HSD11B2P80365 405 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TBC1D25Q3MII6 688 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 OR5W2Q8NH69 310 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 CCL26Q9Y258 94 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TSPAN4O14817 238 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 RP2O75695 350 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 DAPP51397 102 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 SMN1Q16637 294 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MFSD9Q8NBP5 474 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 TMEM38AQ9H6F2 299 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 FANCFQ9NPI8 374 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF195O14628 629 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ACP2P11117 423 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 CRABP1P29762 137 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 GRPRP30550 384 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 PITPNBP48739 271 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 RAB11BQ15907 218 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 RNASE10Q5GAN6 216 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 RNF113BQ8IZP6 322 aaKnown RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 OR51L1Q8NGJ5 315 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 ZMYND19Q96E35 227 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MACROD1Q9BQ69 325 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 HDAC8Q9BY41 377 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 MED17Q9NVC6 651 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 KLK4Q9Y5K2 254 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 IER3IP1Q9Y5U9 82 aa11.14□□□□□ -0.63
DEPDC1-201ENST00000370966 C17orf105B2RV13 164 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 M0R129 80 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 GFRA2O00451 464 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SRPX2O60687 465 aaPredicted RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 LBX1P52954 281 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 PFN3P60673 137 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZC3H14Q6PJT7 736 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 VRK3Q8IV63 474 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 WFDC5Q8TCV5 224 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 NEURL3Q96EH8 262 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 PGAM5Q96HS1 289 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 DDX31Q9H8H2 851 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 TESQ9UGI8 421 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 NAALAD2Q9Y3Q0 740 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 A0A1B0GVC2 190 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 AIFM1O95831 613 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 KCNJ10P78508 379 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ILKQ13418 452 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 TMEM205Q6UW68 189 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC35F2Q8IXU6 374 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 CHTF18Q8WVB6 975 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 ASB15Q8WXK1 588 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 PRSS16Q9NQE7 514 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 BABAM2Q9NXR7 383 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 MGAT4CQ9UBM8 478 aa11.13□□□□□ -0.63
DEPDC1-201ENST00000370966 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms