RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MTHFD2LQ9H903 347 aaPredicted RBP12.7□□□□□ -0.38
TPM3-211ENST00000368531 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 CALML5Q9NZT1 146 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ANAPC2Q9UJX6 822 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 ABCG2Q9UNQ0 655 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 DTNAQ9Y4J8 743 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 HRH3Q9Y5N1 445 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 WIF1Q9Y5W5 379 aa12.7□□□□□ -0.38
TPM3-211ENST00000368531 A0A0G2JPF8 293 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 HNRNPCL3B7ZW38 293 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ALG1L2C9J202 215 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 KIAA0513O60268 411 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 HNRNPCL1O60812 293 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 CYP7B1O75881 506 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 PGM3O95394 542 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 RFPL3SP0C7P2 107 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 HNRNPCL4P0DMR1 293 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 TCEA1P23193 301 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 PPIAP62937 165 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 ALDH6A1Q02252 535 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 FOXO1Q12778 655 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 SNTA1Q13424 505 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 CD226Q15762 336 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ZNF141Q15928 474 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ZNF630Q2M218 657 aaPredicted RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 KLHL26Q53HC5 615 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 RNFT1Q5M7Z0 435 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 REEP3Q6NUK4 255 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 C16orf89Q6UX73 402 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 SERPINA11Q86U17 422 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 CALHM3Q86XJ0 350 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 VRK2Q86Y07 508 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 DEFB107AQ8IZN7 70 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 RBM15BQ8NDT2 890 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 SH3YL1Q96HL8 342 aaPredicted RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 TMEM41AQ96HV5 264 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ZNF583Q96ND8 569 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 DEFB127Q9H1M4 99 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 DSN1Q9H410 356 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 CACYBPQ9HB71 228 aaKnown RBP12.69□□□□□ -0.38
TPM3-211ENST00000368531 ZFP64Q9NPA5 681 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 MED11Q9P086 117 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 ANGPT4Q9Y264 503 aa12.69□□□□□ -0.38
TPM3-211ENST00000368531 SERINC4A6NH21 518 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 LRRC3CA6NJW4 275 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 FAM220BPB1ANY3 271 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 NPIPA5E9PKD4 350 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 H3BNH8 94 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ACOT7O00154 380 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ADAM10O14672 748 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 TFECO14948 347 aaPredicted RBP12.68□□□□□ -0.38
TPM3-211ENST00000368531 SNPHO15079 494 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 TRAPPC6AO75865 159 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 WISP2O76076 250 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 CRYABP02511 175 aaKnown RBP12.68□□□□□ -0.38
TPM3-211ENST00000368531 NGFRP08138 427 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 IL7RP16871 459 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ZNF24P17028 368 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 GDF1P27539 372 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 C17orf67Q0P5P2 114 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 INAQ16352 499 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 VMACQ2NL98 169 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 FNDC7Q5VTL7 733 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 TIGD3Q6B0B8 471 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 PRICKLE2Q7Z3G6 844 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
TPM3-211ENST00000368531 SLC22A16Q86VW1 577 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 PEX5LQ8IYB4 626 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 TMEM251Q8N6I4 163 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
TPM3-211ENST00000368531 HIPK4Q8NE63 616 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 OR2T12Q8NG77 320 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 OR4K17Q8NGC6 315 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 OR52P1PQ8NH57 321 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 BBS10Q8TAM1 723 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 RNF138Q8WVD3 245 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 CDRT15Q96T59 188 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 SPAG4Q9NPE6 437 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
TPM3-211ENST00000368531 FBXL2Q9UKC9 423 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 NPIPA1Q9UND3 350 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 CARD8Q9Y2G2 431 aa12.68□□□□□ -0.38
TPM3-211ENST00000368531 A0A1W2PQD3 144 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 AGAP5A6NIR3 686 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 OIP5O43482 229 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 HCRTR2O43614 444 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms