RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CCDC80Q76M96 950 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 WDR53Q7Z5U6 358 aaPredicted RBP9.2□□□□□ -0.94
TPM3-210ENST00000368530 HMGN2P46Q86SG4 172 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 MRGPRGQ86SM5 289 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 SIMC1Q8NDZ2 872 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 OR7G2Q8NG99 324 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 CYGBQ8WWM9 190 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 MOAP1Q96BY2 351 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 PEX11GQ96HA9 241 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 DOHHQ9BU89 302 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 OSBPL11Q9BXB4 747 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 ZNF700Q9H0M5 742 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 SMURF2Q9HAU4 748 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 IL1RAPQ9NPH3 570 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 DDX18Q9NVP1 670 aaKnown RBP9.2□□□□□ -0.94
TPM3-210ENST00000368530 P2RX2Q9UBL9 471 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 ZNF639Q9UID6 485 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 PCDHGB5Q9Y5G0 923 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 MYO7BQ6PIF6 2116 aa9.2□□□□□ -0.94
TPM3-210ENST00000368530 PRAMEF27A3QJZ7 478 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 TMEM247A6NEH6 219 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 H0YJX3 145 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 PLOD2O00469 737 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 DENRO43583 198 aaKnown RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 CDC123O75794 336 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 SNAP29O95721 258 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 IFNA14P01570 189 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 TFPTP0C1Z6 253 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 PORP16435 677 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 FBLP22087 321 aaKnown RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 PRKACGP22612 351 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 PTGER4P35408 488 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 MAGEA2P43356 314 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 YAP1P46937 504 aaKnown RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 CLCN2P51788 898 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 ADORA2A-AS1P86434 159 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 FOXD4Q12950 439 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 DAG1Q14118 895 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 CDSNQ15517 529 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 MAPK11Q15759 364 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 GPAT3Q53EU6 434 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 IFI44LQ53G44 452 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 OR2T5Q6IEZ7 315 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 TMEM154Q6P9G4 183 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 BHLHB9Q6PI77 547 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 PATL1Q86TB9 770 aaKnown RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 ZDHHC13Q8IUH4 622 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 SLC30A8Q8IWU4 369 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 MARVELD2Q8N4S9 558 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 ZNF808Q8N4W9 903 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 OR2T29Q8NH02 315 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 OR5K1Q8NHB7 308 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 ADAMTS18Q8TE60 1221 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 LZICQ8WZA0 190 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 MMABQ96EY8 250 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 LURAP1Q96LR2 239 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 OR7D2Q96RA2 312 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 NR1H4Q96RI1 486 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 NPLQ9BXD5 320 aaPredicted RBP9.19□□□□□ -0.94
TPM3-210ENST00000368530 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 UBAP1Q9NZ09 502 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 KCNE3Q9Y6H6 103 aa9.19□□□□□ -0.94
TPM3-210ENST00000368530 TRGV8A0A0C4DH27 118 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 MAGEA13PA6NCF6 341 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 CCL21O00585 134 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 HS6ST1O60243 411 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 PGM3O95394 542 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 GPR75O95800 540 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 LYNP07948 512 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 RNH1P13489 461 aaKnown RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 HOXB6P17509 224 aaKnown RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 RIPPLY3P57055 190 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 FUT5Q11128 374 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 NHSL2Q5HYW2 709 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 FAAH2Q6GMR7 532 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 H3F3CQ6NXT2 135 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 UGT2A3Q6UWM9 527 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 CHERPQ8IWX8 916 aaKnown RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 SAMD14Q8IZD0 417 aaPredicted RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 SVOPLQ8N434 492 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 TANKQ92844 425 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 ANKRD9Q96BM1 317 aaPredicted RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 C7orf34Q96L11 122 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 COL21A1Q96P44 957 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 ADI1Q9BV57 179 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 YIPF2Q9BWQ6 316 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 SMPD3Q9NY59 655 aaPredicted RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 SEC14L3Q9UDX4 400 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 CDC14AQ9UNH5 594 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 ZNF835Q9Y2P0 537 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 SH3GLB1Q9Y371 365 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 SAMHD1Q9Y3Z3 626 aaKnown RBP9.18□□□□□ -0.94
TPM3-210ENST00000368530 TESMINQ9Y4I5 508 aa9.18□□□□□ -0.94
TPM3-210ENST00000368530 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 NF1P21359 2839 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms