RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SPDYE7PQ495Y7 208 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 PLXDC2Q6UX71 529 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 GDF7Q7Z4P5 450 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 MAELQ96JY0 434 aaKnown RBP17.14■□□□□ 0.33
CKS1B-203ENST00000368439 TEX37Q96LM6 180 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
CKS1B-203ENST00000368439 PTGES2Q9H7Z7 377 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 UBQLN4Q9NRR5 601 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 AIG1Q9NVV5 245 aa17.14■□□□□ 0.33
CKS1B-203ENST00000368439 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
CKS1B-203ENST00000368439 A0A1W2PQD3 144 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 OR2M5A3KFT3 312 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 H0Y3Z8 333 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 ZNF195O14628 629 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 IL2RAP01589 272 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 KITP10721 976 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 EPHA3P29320 983 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 DLX5P56178 289 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 RCAN2Q14206 197 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 GLYR1Q49A26 553 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-203ENST00000368439 SPANXN4Q5MJ08 99 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 MAVSQ7Z434 540 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 DMRTC2Q8IXT2 367 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-203ENST00000368439 ADAMTS15Q8TE58 950 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 C14orf79Q96F83 325 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 OR7D2Q96RA2 312 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 KLHDC3Q9BQ90 382 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 CLCF1Q9UBD9 225 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 ZNF629Q9UEG4 869 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-203ENST00000368439 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-203ENST00000368439 ZNF337Q9Y3M9 751 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 GPR45Q9Y5Y3 372 aa17.13■□□□□ 0.33
CKS1B-203ENST00000368439 TACC2O95359 2948 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 GOLGA8QA0A0J9YX86 632 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 PRSS51A0A1B0GVH4 220 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 GOLGA8OA6NCC3 632 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 NPIPB9F8W1W9 429 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 GOLGA8NF8WBI6 632 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 HCRTR2O43614 444 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 NDUFB5O43674 189 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 SOX30O94993 753 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 KRT16P08779 473 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 IL12AP29459 219 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 CLNS1AP54105 237 aaKnown RBP17.12■□□□□ 0.33
CKS1B-203ENST00000368439 UFM1P61960 85 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 CD226Q15762 336 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 DCST2Q5T1A1 773 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 ARSKQ6UWY0 536 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 C6orf120Q7Z4R8 191 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 ANKRD46Q86W74 232 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 GATSQ8NAP1 163 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 OR5D16Q8NGK9 328 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 OR5M1Q8NGP8 315 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 ZNF75CPQ92670 426 aaPredicted RBP17.12■□□□□ 0.33
CKS1B-203ENST00000368439 SH3GL2Q99962 352 aa17.12■□□□□ 0.33
CKS1B-203ENST00000368439 SLCO1B7G3V0H7 640 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 DVL2O14641 736 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 PEPDP12955 493 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 BMP5P22003 454 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 SOAT1P35610 550 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 SUCLG1P53597 346 aaKnown RBP17.11■□□□□ 0.33
CKS1B-203ENST00000368439 NME5P56597 212 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 RPS26P62854 115 aaKnown RBP17.11■□□□□ 0.33
CKS1B-203ENST00000368439 DPY19L1Q2PZI1 675 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 FBXL19-AS1Q494R0 122 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 SLC9B1Q4ZJI4 515 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
CKS1B-203ENST00000368439 ANXA8L1Q5VT79 327 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 RAET1LQ5VY80 246 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 OR4A15Q8NGL6 344 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 WNT2BQ93097 391 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 CHMP6Q96FZ7 201 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 NPAS1Q99742 590 aa17.11■□□□□ 0.33
CKS1B-203ENST00000368439 HEATR5AQ86XA9 2040 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 NPIPA5A0A0B4J1W7 369 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 RNF103-CHMP3A0A140T963 221 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 SHISA8B8ZZ34 492 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 E9PBE3 544 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 NPIPA7E9PJI5 369 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 H0YC42 278 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 LINC01387J3KSC0 135 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 SYT5O00445 386 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 GMFGO60234 142 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 RCBTB2O95199 551 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 CPSF4O95639 269 aaKnown RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 IL18BPO95998 194 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 NPIPA8P0DM63 369 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 MATN1P21941 496 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 CTSSP25774 331 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 SSTR2P30874 369 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-203ENST00000368439 FOXF2Q12947 444 aa17.1■□□□□ 0.33
CKS1B-203ENST00000368439 FAM174BQ3ZCQ3 159 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms