RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SPARTQ8N0X7 666 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 TOMM40LQ969M1 308 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 MICU1Q9BPX6 476 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 UQCC2Q9BRT2 126 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 RNF32Q9H0A6 362 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 K7EPK0 472 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 SNHG28P0DPA3 235 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 RAB40BQ12829 278 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 PLA2G7Q13093 441 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 FAM71E2Q8N5Q1 922 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 BOLLQ8N9W6 283 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 ZNF160Q9HCG1 818 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 GSRP00390 522 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 CA5AP35218 305 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 PLAG1Q6DJT9 500 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 TMEM107Q6UX40 140 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 LMF1Q96S06 567 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 HLA-AP01891 365 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 HLA-DOBP13765 273 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 PLBD1Q6P4A8 553 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 KCNA7Q96RP8 456 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 GABARAPH6UMI1 98 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 GABARAPO95166 117 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 CTXN1P60606 82 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 SOWAHAQ2M3V2 549 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 TMEM244Q5VVB8 128 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 SBSNQ6UWP8 590 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 FEVQ99581 238 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 ST6GALNAC5Q9BVH7 336 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 KLHL42Q9P2K6 505 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 SLC35F2Q8IXU6 374 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 MYADMQ96S97 322 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 LRP5LA4QPB2 252 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 UGDHO60701 494 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 IMPA1P29218 277 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 OGDHQ02218 1023 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 GALNT1Q10472 559 aaPredicted RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 CD300LGQ6UXG3 332 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 GTF2H5Q6ZYL4 71 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 CSNK1A1LQ8N752 337 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 Q8N9G6 341 aaPredicted RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 SEMA6DQ8NFY4 1073 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 FGGYQ96C11 551 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 FZD8Q9H461 694 aa11.78□□□□□ -0.52
TPR-201ENST00000367478 MRPL15Q9P015 296 aaKnown RBP11.78□□□□□ -0.52
TPR-201ENST00000367478 PIGRP01833 764 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 MICAQ29983 383 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SFRP5Q5T4F7 317 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.52
TPR-201ENST00000367478 GPR83Q9NYM4 423 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SLC35A3Q9Y2D2 325 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 INPPL1O15357 1258 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 ETV5P41161 510 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 LMF2Q9BU23 707 aaKnown RBP11.77□□□□□ -0.52
TPR-201ENST00000367478 FBRSQ9HAH7 460 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 OR2T1O43869 369 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 MTX2O75431 263 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 ZDHHC11BP0C7U3 371 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 BAGE3Q86Y29 109 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 BAGE2Q86Y30 109 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SLC43A2Q8N370 569 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 MSLNLQ96KJ4 702 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.52
TPR-201ENST00000367478 SEC14L6B5MCN3 397 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 LCATP04180 440 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 STT3AP46977 705 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 FAM74A1Q5RGS3 127 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 PRAMEF8Q5VWM4 474 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 PRAMEF7Q5VXH5 474 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 MEX3BQ6ZN04 569 aaKnown RBP11.77□□□□□ -0.53
TPR-201ENST00000367478 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 TMEM59LQ9UK28 342 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 BLACEA4D250 179 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 CEBPZOSA8MTT3 80 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 MAGEB4O15481 346 aaPredicted RBP11.77□□□□□ -0.53
TPR-201ENST00000367478 TYRP1P17643 537 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 SGSHP51688 502 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 RBMS2Q15434 407 aaKnown RBP11.77□□□□□ -0.53
TPR-201ENST00000367478 TECRLQ5HYJ1 363 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 GCNT2Q8N0V5 402 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 LFNGQ8NES3 379 aa11.77□□□□□ -0.53
TPR-201ENST00000367478 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms