RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TBC1D3GQ6DHY5 549 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CCBE1Q6UXH8 406 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PRSS35Q8N3Z0 413 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 VGLL2Q8N8G2 317 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR13C2Q8NGS9 318 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CCR10P46092 362 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF81P51508 661 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 POU2AF1Q16633 256 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GRHL3Q8TE85 626 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CITED1Q99966 193 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 POLDIP3Q9BY77 421 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DCAF13Q9NV06 445 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PEX12O00623 359 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PSMD10O75832 226 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DNASE1P24855 282 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GTF2A2P52657 109 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 KIAA0319Q5VV43 1072 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 RPL10LQ96L21 214 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MCOLN1Q9GZU1 580 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 METTL9Q9H1A3 318 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PAQR5Q9NXK6 330 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 COMMD3Q9UBI1 195 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SULT2B1O00204 365 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CD80P33681 288 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NRLP54845 237 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GUK1Q16774 197 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MFSD14CQ5VZR4 134 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SIGIRRQ6IA17 410 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZDHHC24Q6UX98 284 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GPRIN1Q7Z2K8 1008 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LILRB1Q8NHL6 650 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NACC2Q96BF6 587 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SORCS2Q96PQ0 1159 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GPX7Q96SL4 187 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CHIAQ9BZP6 476 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GSTZ1O43708 216 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 DBIP07108 87 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ITGB5P18084 799 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM71E1Q6IPT2 247 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C7orf61Q8IZ16 206 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RHOFQ9HBH0 211 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 INTS6Q9UL03 887 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GLULP15104 373 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM98CQ17RN3 349 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PNLIPRP3Q17RR3 467 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FBXL19Q6PCT2 694 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NRSN1Q8IZ57 195 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CRYBG2Q8N1P7 616 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LKAAEAR1Q8TD35 194 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CRTAC1Q9NQ79 661 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 IGSF6O95976 241 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MELTFP08582 738 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C9orf64Q5T6V5 341 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CDHR3Q6ZTQ4 885 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 APTXQ7Z2E3 356 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GRAMD2AQ8IUY3 354 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 HLA-CQ95604 372 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C5orf34Q96MH7 638 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ANGPTL4Q9BY76 406 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CD244Q9BZW8 370 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ATG5Q9H1Y0 275 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SALL4Q9UJQ4 1053 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 F8W036 122 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PIGAP37287 484 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM244Q5VVB8 128 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADGRF4Q8IZF3 695 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PKP2Q99959 881 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35D1Q9NTN3 355 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 DNAJC15Q9Y5T4 150 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 KIR2DS1A0A191URI9 304 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR5K3A6NET4 321 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LYRM1O43325 122 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TBX19O60806 448 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 POU3F2P20265 443 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 S1PR1P21453 382 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ZBTB25P24278 435 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TACR1P25103 407 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GABRB3P28472 473 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 KIR2DS4P43632 304 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM3BP58499 235 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 KIR2DS1Q14954 304 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35E3Q7Z769 313 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PPTC7Q8NI37 304 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 HMGB4Q8WW32 186 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C12orf42Q96LP6 360 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ATG10Q9H0Y0 220 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 POLR3FQ9H1D9 316 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADAM7Q9H2U9 754 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 UBIAD1Q9Y5Z9 338 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 COLEC10Q9Y6Z7 277 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SLC16A8O95907 504 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR10J1P30954 320 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ASPAP45381 313 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PCBD1P61457 104 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SLC43A3Q8NBI5 491 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO15Q8NCQ5 510 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OLIG1Q8TAK6 271 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms