RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 E2F1Q01094 437 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 PLGLAQ15195 96 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 LILRA6Q6PI73 481 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 DHRS13Q6UX07 377 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 OR2I1PQ8NGU4 316 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 NANOS1Q8WY41 292 aaKnown RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 CCDC115Q96NT0 180 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 ARMC1Q9NVT9 282 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 TAS2R10Q9NYW0 307 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM181Q9P2C4 612 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM202A6NGA9 273 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 K7ESM1 405 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MMP2P08253 660 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 GLULP15104 373 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 PKLRP30613 574 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SQSTM1Q13501 440 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MAD2L1BPQ15013 274 aaPredicted RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 TUBA3EQ6PEY2 450 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SNX29P2Q8IUI4 249 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 ISL2Q96A47 359 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MUCL1Q96DR8 90 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 HINT2Q9BX68 163 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 KIR3DX1Q9H7L2 352 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 FSCN3Q9NQT6 498 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 THSD1Q9NS62 852 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 DCAF13Q9NV06 445 aaKnown RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SLC7A7Q9UM01 511 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SLC35A3Q9Y2D2 325 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 MYH6P13533 1939 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 FTCDNL1E5RQL4 147 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 AP1G1O43747 822 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 UBL4AP11441 157 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 DPTQ07507 201 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 LEG1Q6P5S2 330 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 ETFBKMTQ8IXQ9 262 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SPEM1Q8N4L4 309 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 C12orf43Q96C57 262 aaKnown RBP10.87□□□□□ -0.67
SYNE1-204ENST00000367248 DPH1Q9BZG8 443 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 ATP13A2Q9NQ11 1180 aa10.87□□□□□ -0.67
SYNE1-204ENST00000367248 SLC5A10A0PJK1 596 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 C5orf51A6NDU8 294 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF12P17014 697 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CCSMST1Q4G0I0 132 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 Q6ZSR9 355 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM239Q8WW34 195 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 HPS1Q92902 700 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SLITRK5O94991 958 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 STSP08842 583 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 ALDOCP09972 364 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 FUT1P19526 365 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM196Q5HYL7 178 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 C1QTNF2Q9BXJ5 285 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CHIAQ9BZP6 476 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CNIH4Q9P003 139 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PCDHGB6Q9Y5F9 930 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PLSCR5A0PG75 271 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SPHARQ15513 63 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MRGPRX1Q96LB2 322 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 ENY2Q9NPA8 101 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 USP36Q9P275 1121 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MYEF2Q9P2K5 600 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF221Q9UK13 617 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 OR7A17O14581 309 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CNR2P34972 360 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MECP2P51608 486 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PRPS1P60891 318 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SEC23BQ15437 767 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SYPL1Q16563 259 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 C14orf28Q4W4Y0 310 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 HS3ST5Q8IZT8 346 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CALHM2Q9HA72 323 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 KLHL21Q9UJP4 597 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MYO10Q9HD67 2058 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PRAMEF33A0A0G2JMD5 474 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PRAMEF10O60809 474 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 DNAJB5O75953 348 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 ARNTP27540 789 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 GLP1RP43220 463 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TNFRSF17Q02223 184 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 MICAQ29983 383 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 HSD17B12Q53GQ0 312 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SSX6Q7RTT6 188 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 TSPYL5Q86VY4 417 aaPredicted RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 SLC37A2Q8TED4 501 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 CDC6Q99741 560 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 NXF5Q9H1B4 397 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 NXT1Q9UKK6 140 aaKnown RBP10.86□□□□□ -0.67
SYNE1-204ENST00000367248 B3GALT4O96024 378 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 NPPBP16860 134 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 KCNJ10P78508 379 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 PIGFQ07326 219 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 GK3PQ14409 553 aa10.86□□□□□ -0.67
SYNE1-204ENST00000367248 LIPKQ5VXJ0 399 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms