RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 CFL2Q9Y281 166 aa13.85□□□□□ -0.19
NEK2-201ENST00000366998 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
NEK2-201ENST00000366998 EFCAB7A8K855 629 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 VGLL3A8MV65 326 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 M0R129 80 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 BCAS1O75363 584 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 WBP4O75554 376 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 DDAH2O95865 285 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 GUSBP08236 651 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 IGFBP1P08833 259 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 FOXL2P58012 376 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 CXCR4P61073 352 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 C1orf94Q6P1W5 598 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 LANCL3Q6ZV70 420 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 OR14A16Q8NHC5 309 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 PIGXQ8TBF5 258 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 GNPDA2Q8TDQ7 276 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ZNF721Q8TF20 911 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 APH1BQ8WW43 257 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 CNOT9Q92600 299 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 DAZLQ92904 295 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 ART5Q96L15 291 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 GAL3ST4Q96RP7 486 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 PAK1IP1Q9NWT1 392 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 TESQ9UGI8 421 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 R4GN57 208 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 WDFY4Q6ZS81 3184 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 TRAPPC13A5PLN9 417 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 NTN3O00634 580 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 THY1P04216 161 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 HBQ1P09105 142 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ZGLP1P0C6A0 271 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 PTNP21246 168 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 HTR2AP28223 471 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ATP12AP54707 1039 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 PSMD4P55036 377 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 ALDH6A1Q02252 535 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 COX10Q12887 443 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ILKQ13418 452 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 OR1Q1Q15612 314 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 DECR1Q16698 335 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 CNPY1Q3B7I2 92 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ZNF540Q8NDQ6 660 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ACOT11Q8WXI4 607 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 EFHD2Q96C19 240 aaPredicted RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 ARSGQ96EG1 525 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 LMF1Q96S06 567 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 NODALQ96S42 347 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 CTRCQ99895 268 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 POLR2J2Q9GZM3 115 aaKnown RBP13.84□□□□□ -0.19
NEK2-201ENST00000366998 TGIF2Q9GZN2 237 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 CXorf56Q9H5V9 222 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 ZNF226Q9NYT6 803 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 COPS7AQ9UBW8 275 aa13.84□□□□□ -0.19
NEK2-201ENST00000366998 POLR1CO15160 346 aaPredicted RBP13.83□□□□□ -0.2
NEK2-201ENST00000366998 IGKV3-11P04433 115 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 HTR1AP08908 422 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 GSTM3P21266 225 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 DRD5P21918 477 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 PPICP45877 212 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 PMS2P3Q13401 168 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 ZNF141Q15928 474 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 AP1ARQ63HQ0 302 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 PRICKLE2Q7Z3G6 844 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 SPARTQ8N0X7 666 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 PLPP5Q8NEB5 264 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 RHOXF1Q8NHV9 184 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 RHBDD1Q8TEB9 315 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 TMEM255BQ8WV15 326 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 FAM46AQ96IP4 442 aaKnown RBP13.83□□□□□ -0.2
NEK2-201ENST00000366998 LOXL4Q96JB6 756 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 GPA33Q99795 319 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 RBM38Q9H0Z9 239 aaKnown RBP13.83□□□□□ -0.2
NEK2-201ENST00000366998 NXF5Q9H1B4 397 aaKnown RBP13.83□□□□□ -0.2
NEK2-201ENST00000366998 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 C14orf105Q9NVL8 296 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 CNIH4Q9P003 139 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 SPEGQ15772 3267 aa13.83□□□□□ -0.2
NEK2-201ENST00000366998 H3BSA7 217 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 PIP5K1CO60331 668 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 FMO6PO60774 539 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 HEXBP07686 556 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 PLAURQ03405 335 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 TRA2AQ13595 282 aaKnown RBP eCLIP13.82□□□□□ -0.2
NEK2-201ENST00000366998 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.2
NEK2-201ENST00000366998 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 CD300LDQ6UXZ3 194 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 PTCHD4Q6ZW05 846 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 BMP8AQ7Z5Y6 402 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 CCDC103Q8IW40 242 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 LCORQ96JN0 433 aaPredicted RBP13.82□□□□□ -0.2
NEK2-201ENST00000366998 ZNF559Q9BR84 538 aa13.82□□□□□ -0.2
NEK2-201ENST00000366998 TMEM27Q9HBJ8 222 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms