RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SPATA19Q7Z5L4 167 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 SERPINA9Q86WD7 417 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 PCP2Q8IVA1 136 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 KIF18AQ8NI77 898 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 RAET1EQ8TD07 263 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 GLYATL1Q969I3 302 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 LRRC58Q96CX6 371 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 OR10C1Q96KK4 312 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 RPGRIP1Q96KN7 1286 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 RASL11BQ9BPW5 248 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 NDFIP1Q9BT67 221 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CHMP4AQ9BY43 222 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 POLR2J2Q9GZM3 115 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 POLR2J3Q9H1A7 115 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 RABEP2Q9H5N1 569 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 DMAP1Q9NPF5 467 aaPredicted RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 C5AR2Q9P296 337 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 MTRF1LQ9UGC7 380 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZNF230Q9UIE0 474 aaPredicted RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 KMT2BQ9UMN6 2715 aaPredicted RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 HELZ2Q9BYK8 2649 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 SDK2Q58EX2 2172 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CARMIL3Q8ND23 1372 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 COL11A1P12107 1806 aaPredicted RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 K7N7A8 449 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CHEK1O14757 476 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 ANGPTL7O43827 346 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 PGK2P07205 417 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZFYP08048 801 aaPredicted RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 POLR2MP0CAP2 368 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 AQP1P29972 269 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CRISP3P54108 245 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 MTTPP55157 894 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 RPS6P62753 249 aaKnown RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 KLHL30Q0D2K2 578 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 SLC39A6Q13433 755 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CAMK2DQ13557 499 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 RAB35Q15286 201 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CDKN3Q16667 212 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 SASS6Q6UVJ0 657 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CLEC4GQ6UXB4 293 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 UNQ9370/PRO34162Q6UXP9 181 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 BHLHA15Q7RTS1 189 aaPredicted RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 SIAH3Q8IW03 269 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 OR52I1Q8NGK6 324 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 CDKN2AIPNLQ96HQ2 116 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 FER1L6-AS2Q96M78 137 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 RAB3IPQ96QF0 476 aaPredicted RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 SLC25A22Q9H936 323 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 STARD5Q9NSY2 213 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 PIGVQ9NUD9 493 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 DDX28Q9NUL7 540 aaKnown RBP0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZNF407Q9C0G0 2248 aa0.44□□□□□ -2.34
RNU6-238P-201ENST00000363313 H0YIG0 161 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 WDR46O15213 610 aaKnown RBP0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 GFPT2O94808 682 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 REC8O95072 547 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 PSMD8P48556 350 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 PPP5CP53041 499 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 PRPS1P60891 318 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 RND3P61587 244 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 CYBRD1Q53TN4 286 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 CAMK2N1Q7Z7J9 78 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 PEX5LQ8IYB4 626 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 Q8N976 141 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 HAS2Q92819 552 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 TVP23CQ96ET8 276 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 CXorf58Q96LI9 332 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 ACCSQ96QU6 501 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 TSPAN18Q96SJ8 248 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 APOOQ9BUR5 198 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 FUNDC2Q9BWH2 189 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 CARD6Q9BX69 1037 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 ANKRD2Q9GZV1 360 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 SRD5A3Q9H8P0 318 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 ACOXLQ9NUZ1 547 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 RBM28Q9NW13 759 aaKnown RBP0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 ERVK-18Q9QC07 812 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 MBD2Q9UBB5 411 aa0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 UBQLN1Q9UMX0 589 aaKnown RBP0.43□□□□□ -2.34
RNU6-238P-201ENST00000363313 SHANK1Q9Y566 2161 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 KIAA0754O94854 1291 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 GAS8O95995 478 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 APRTP07741 180 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 IGFBP1P08833 259 aaPredicted RBP0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 C8orf89P0DMQ9 161 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 NMUP48645 174 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 RAD23AP54725 363 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 ASPGQ86U10 573 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 COLGALT1Q8NBJ5 622 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 PELI1Q96FA3 418 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 HDHD3Q9BSH5 251 aaPredicted RBP0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 SRXN1Q9BYN0 137 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 FAM129AQ9BZQ8 928 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 MAGT1Q9H0U3 335 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 NAPBQ9H115 298 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 CAB39LQ9H9S4 337 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 DUSP12Q9UNI6 340 aa0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 MRPS2Q9Y399 296 aaKnown RBP0.42□□□□□ -2.34
RNU6-238P-201ENST00000363313 IGLV11-55A0A075B6I3 123 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms