RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TAP2Q03519 686 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 CDK10Q15131 360 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 TMEM151AQ8N4L1 468 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 NPRL2Q8WTW4 380 aa17.46■□□□□ 0.39
CLIP2-202ENST00000361545 MBNL1Q9NR56 388 aaKnown RBP17.46■□□□□ 0.39
CLIP2-202ENST00000361545 PHYHO14832 338 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 HRGP04196 525 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 ARL14Q8N4G2 192 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 SLC37A3Q8NCC5 494 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 ANKK1Q8NFD2 765 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 SLC6A15Q9H2J7 730 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 NUDT15Q9NV35 164 aa17.46■□□□□ 0.38
CLIP2-202ENST00000361545 OR6C70A6NIJ9 312 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 HOXC11O43248 304 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 EIF2B1Q14232 305 aaKnown RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF517Q6ZMY9 492 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 WBP2Q969T9 261 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 ISOC1Q96CN7 298 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM9Q9P0T7 183 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 SLC1A7O00341 560 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 CASC3O15234 703 aaKnown RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 EEF1E1O43324 174 aaKnown RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 RBBP9O75884 186 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 OR7A10O76100 309 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 C7P10643 843 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 CFL1P23528 166 aaKnown RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 THBS2P35442 1172 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 FNTBP49356 437 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 ERVK-25P63136 954 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 HBA1P69905 142 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 OPN5Q6U736 354 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 OR10A4Q9H209 315 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF224Q9NZL3 707 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 TMPRSS11EQ9UL52 423 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 PRRT4C9JH25 899 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 KIAA0513O60268 411 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 SLC19A2O60779 497 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 RGS9O75916 674 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM225BP0DP42 221 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 FAM205BPQ63HN1 556 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 C3orf33Q6P1S2 294 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 POGLUT1Q8NBL1 392 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 F10P00742 488 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 DCTP40126 519 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 EIF5AP63241 154 aaKnown RBP17.45■□□□□ 0.38
CLIP2-202ENST00000361545 SLC5A12Q1EHB4 618 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM52BQ4KMG9 183 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 SERPINA11Q86U17 422 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 MNTQ99583 582 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 BTBD2Q9BX70 525 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 SLAMF7Q9NQ25 335 aa17.45■□□□□ 0.38
CLIP2-202ENST00000361545 GCAP28676 217 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 FAM71F1Q96KD3 344 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 MAP1BP46821 2468 aaKnown RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 PHIPQ8WWQ0 1821 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 TCRBV5S1A1TA0A578 114 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 H0YJX3 145 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 K7ESM1 405 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 MAGEA2P43356 314 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 RSU1Q15404 277 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 TSPYL5Q86VY4 417 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 OR8H3Q8N146 312 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 METTL4Q8N3J2 472 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 CLMPQ9H6B4 373 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 UBQLN4Q9NRR5 601 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 CARD8Q9Y2G2 431 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 SYT7O43581 403 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 RBMXP38159 391 aaKnown RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 DAP3P51398 398 aaKnown RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 OR1D5P58170 312 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 DCDP81605 110 aaKnown RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 SEMA3BQ13214 749 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 ATXN7L3Q14CW9 347 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 PRAMEF20Q5VT98 475 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 FAM217AQ8IXS0 508 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 RFT1Q96AA3 541 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 CAMK2AQ9UQM7 478 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF850A8MQ14 1090 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 LINC01565O15544 149 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 CRABP1P29762 137 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 ADPRHP54922 357 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 RAB38P57729 211 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 LRRN1Q6UXK5 716 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 BPIFA2Q96DR5 249 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 UBXN10Q96LJ8 280 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 FOXQ1Q9C009 403 aa17.44■□□□□ 0.38
CLIP2-202ENST00000361545 PAK1IP1Q9NWT1 392 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-202ENST00000361545 M0R129 80 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 SLITRK5O94991 958 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 CDNFQ49AH0 187 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF595Q8IYB9 648 aa17.43■□□□□ 0.38
CLIP2-202ENST00000361545 METTL2AQ96IZ6 378 aaKnown RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 DCAF13Q9NV06 445 aaKnown RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 CSNK2A1P68400 391 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-202ENST00000361545 MLC1Q15049 377 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms