RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FNDC8Q8TC99 324 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZFYVE21Q9BQ24 234 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 STYXL1Q9Y6J8 313 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 TRAPPC2LH3BP13 241 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ATP6V1G1O75348 118 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ATXN7L3Q14CW9 347 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZNF423Q2M1K9 1284 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CYS1Q717R9 158 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 TMEM150AQ86TG1 271 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 RDH16O75452 317 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 FABP1P07148 127 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 FOSL1P15407 271 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.16□□□□□ -0.944e-7■■■□□ 15
CUX1-203ENST00000360264 CBARPQ8N350 705 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 WDR20Q8TBZ3 569 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZBTB20Q9HC78 741 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 EME2A4GXA9 379 aaPredicted RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 POU3F2P20265 443 aaPredicted RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 PRKACGP22612 351 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 EPHA4P54764 986 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 MRPS10P82664 201 aaKnown RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 OR1S1Q8NH92 325 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 CWH43Q9H720 699 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 H3BSA7 217 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 GMDSO60547 372 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 CTXN1P60606 82 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TMEM135Q86UB9 458 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 ZDHHC18Q9NUE0 388 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 SLC7A7Q9UM01 511 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TSFMP43897 325 aaKnown RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 TRMT2BQ96GJ1 504 aaKnown RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 SSX3Q99909 188 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 EXTL2Q9UBQ6 330 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 SPG11Q96JI7 2443 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 CD300LBA8K4G0 201 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TIMP1P01033 207 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 COMMD6Q7Z4G1 85 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 C12orf71A8MTZ7 269 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 A8MVM7 634 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 PPP1R3DO95685 299 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 APOC3P02656 99 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 BDKRB2P30411 391 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 GATMP50440 423 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 RAB33AQ14088 237 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TWNKQ96RR1 684 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 CRB3Q9BUF7 120 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 LCATP04180 440 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 PRKACBP22694 351 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TAS2R19P59542 299 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 PROX2Q3B8N5 592 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 JPH3Q8WXH2 748 aaPredicted RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 F2RL3Q96RI0 385 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 INTS14Q96SY0 518 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 TTTY10Q9BZA0 68 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 ACTR10Q9NZ32 417 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 STEAP1Q9UHE8 339 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 BTNL2Q9UIR0 455 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 EMC9Q9Y3B6 208 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 ATG4BQ9Y4P1 393 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 KIAA0513O60268 411 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
CUX1-203ENST00000360264 IL13RA1P78552 427 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 PEA15Q15121 130 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 MAN2C1Q9NTJ4 1040 aa9.15□□□□□ -0.94
CUX1-203ENST00000360264 BCAS1O75363 584 aaPredicted RBP9.15□□□□□ -0.95
CUX1-203ENST00000360264 DSC1Q08554 894 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 DPY19L4Q7Z388 723 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 OR8K5Q8NH50 307 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 OR51Q1Q8NH59 317 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 ZFAND2BQ8WV99 257 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 ECHDC3Q96DC8 303 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 TSSK2Q96PF2 358 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 A0A0J9YY10 115 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 GAAP10253 952 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 PSMF1Q92530 271 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 LHX6Q9UPM6 363 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 ROBO1Q9Y6N7 1651 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 DOPEY1Q5JWR5 2465 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 DIRAS1O95057 198 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 SNAI1O95863 264 aaPredicted RBP9.15□□□□□ -0.95
CUX1-203ENST00000360264 FGF3P11487 239 aaPredicted RBP9.15□□□□□ -0.95
CUX1-203ENST00000360264 NR4A2P43354 598 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 SNU13P55769 128 aaKnown RBP9.15□□□□□ -0.95
CUX1-203ENST00000360264 PRSS48Q7RTY5 328 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 PEX11GQ96HA9 241 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 DYNLRB1Q9NP97 96 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 SALL4Q9UJQ4 1053 aa9.15□□□□□ -0.95
CUX1-203ENST00000360264 A0A0A6YYH2 397 aa9.14□□□□□ -0.95
CUX1-203ENST00000360264 A6NJ64 397 aa9.14□□□□□ -0.95
CUX1-203ENST00000360264 SEC14L5O43304 696 aa9.14□□□□□ -0.95
CUX1-203ENST00000360264 CDKN2CP42773 168 aa9.14□□□□□ -0.95
CUX1-203ENST00000360264 GSCP56915 257 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms