RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ANKS4BQ8N8V4 417 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 PRR7Q8TB68 274 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 RCN3Q96D15 328 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 SH3YL1Q96HL8 342 aaPredicted RBP17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 LRRC37BQ96QE4 947 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 SH3GL1Q99961 368 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CCDC106Q9BWC9 280 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ZDHHC11Q9H8X9 412 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 MED11Q9P086 117 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 DTNAQ9Y4J8 743 aa17.48■□□□□ 0.39
HLA-DRB1-201ENST00000360004 C15orf38-AP3S2A0A0A6YYH1 394 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 A0A1B0GTH9 108 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 A0A1W2PQD3 144 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 NDUFAB1O14561 156 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 AIM2O14862 343 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 HCRTR2O43614 444 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 SHOX2O60902 331 aaPredicted RBP17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CYP7B1O75881 506 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CBX6O95503 412 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CELA3AP09093 270 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CCR4P51679 360 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 MTPNP58546 118 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CHRNEQ04844 493 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ART3Q13508 389 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 RUNDC3AQ59EK9 446 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 TYW3Q6IPR3 259 aaKnown RBP17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 LRRC74BQ6ZQY2 392 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 MTERF4Q7Z6M4 381 aaKnown RBP17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 PEX5LQ8IYB4 626 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 WDSUB1Q8N9V3 476 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ANKRD27Q96NW4 1050 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CPPED1Q9BRF8 314 aaPredicted RBP17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 SLC6A15Q9H2J7 730 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 OSGIN2Q9Y236 505 aa17.47■□□□□ 0.39
HLA-DRB1-201ENST00000360004 KIAA0513O60268 411 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 TNFRSF21O75509 655 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 NPPAP01160 153 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 CHRM4P08173 479 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 UBL4AP11441 157 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 HOXB9P17482 250 aaPredicted RBP17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 DPP4P27487 766 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 PTGS2P35354 604 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 UQCRFS1P47985 274 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ZNF41P51814 821 aaPredicted RBP17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 MVDP53602 400 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 GAS1P54826 345 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 FUT5Q11128 374 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 FNDC7Q5VTL7 733 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 APOOLQ6UXV4 268 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 FRRS1Q6ZNA5 592 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 HMGN2P46Q86SG4 172 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 YRDCQ86U90 279 aaKnown RBP17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 B4GALNT2Q8NHY0 566 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 RNF138Q8WVD3 245 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 LRRC58Q96CX6 371 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 TMEM19Q96HH6 336 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 MTHFD2LQ9H903 347 aaPredicted RBP17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 EFCAB1Q9HAE3 211 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 TAS2R10Q9NYW0 307 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 FBXL2Q9UKC9 423 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 ACAD8Q9UKU7 415 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 LIPGQ9Y5X9 500 aa17.46■□□□□ 0.39
HLA-DRB1-201ENST00000360004 PRRC2CQ9Y520 2896 aaKnown RBP17.46■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TRBV5-3A0A0A0MS03 114 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TRGV8A0A0C4DH27 118 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SERINC4A6NH21 518 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 PRRG2O14669 202 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 HCN1O60741 890 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 WISP1O95388 367 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 CSTAP01040 98 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 HPNP05981 417 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TPOP07202 933 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 NUDT7P0C024 238 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 IL7RP16871 459 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 HK1P19367 917 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SLC6A2P23975 617 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 MSX1P28360 303 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SRD5A2P31213 254 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 DSCR4P56555 118 aaPredicted RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 GANABQ14697 944 aaKnown RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 EIF2S3LQ2VIR3 472 aaKnown RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 KLHL26Q53HC5 615 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 WIPI1Q5MNZ9 446 aaPredicted RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TRILQ7L0X0 811 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 EIF3MQ7L2H7 374 aaKnown RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 IFNEQ86WN2 208 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TREML1Q86YW5 311 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 FAM83FQ8NEG4 500 aaPredicted RBP17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 OR2M3Q8NG83 312 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 NFKBIDQ8NI38 313 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 BCAS4Q8TDM0 211 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SLC38A5Q8WUX1 472 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SARAFQ96BY9 339 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 ECSITQ9BQ95 431 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 SLC39A3Q9BRY0 314 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 TRIM8Q9BZR9 551 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 MYLK2Q9H1R3 596 aa17.45■□□□□ 0.38
HLA-DRB1-201ENST00000360004 ACKR4Q9NPB9 350 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms