RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 INIPQ9NRY2 104 aa13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 QPCTLQ9NXS2 382 aa13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 CLEC2DQ9UHP7 191 aa13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 PILRAQ9UKJ1 303 aa13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 GPR55Q9Y2T6 319 aaPredicted RBP13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 HS3ST3A1Q9Y663 406 aa13.32□□□□□ -0.28
NIPAL3-203ENST00000358028 IQCMA0A1B0GVH7 501 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 DUXAA6NLW8 204 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 TLX2O43763 284 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 PRKYO43930 277 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 AGR2O95994 175 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 CKMT1AP12532 417 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 PRKAR1BP31321 381 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 SEPHS1P49903 392 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 PDX1P52945 283 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 SIM1P81133 766 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 RUNX1T1Q06455 604 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 RAB40BQ12829 278 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 ILF3Q12906 894 aaKnown RBP eCLIP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 TRAM2Q15035 370 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 Q6ZSR6 202 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 OR13H1Q8NG92 308 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 OR52I1Q8NGK6 324 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 OR52P1PQ8NH57 321 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 TEX47Q8TBZ9 253 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 HTRA1Q92743 480 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 TMCO6Q96DC7 493 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 PRR14Q9BWN1 585 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 IL21RQ9HBE5 538 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 EXOSC4Q9NPD3 245 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 PRDM9Q9NQV7 894 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 DAPP1Q9UN19 280 aa13.31□□□□□ -0.28
NIPAL3-203ENST00000358028 A0A087WUU8 490 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TMEM129A0AVI4 362 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SNPHO15079 494 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 PRODHO43272 600 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 FRS3O43559 492 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 DNAJB6O75190 326 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CYP7B1O75881 506 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TNFP01375 233 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 IL1AP01583 271 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SYPP08247 313 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 HBQ1P09105 142 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ACP2P11117 423 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CPEP16870 476 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 MYL12AP19105 171 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF10P21506 573 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TLX1P31314 330 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TNFSF8P32971 234 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SOX3P41225 446 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 DOC2BQ14184 412 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 NCCRP1Q6ZVX7 275 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ABHD13Q7L211 337 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ABI3BPQ7Z7G0 1075 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 AKAP14Q86UN6 197 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 KIF18BQ86Y91 864 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 PHC2Q8IXK0 858 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC22A18ASQ8N1D0 253 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CLDN22Q8N7P3 220 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TOR1AIP2Q8NFQ8 470 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 DIO2Q92813 273 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CDS1Q92903 461 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 COL26A1Q96A83 441 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 LRR1Q96L50 414 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC38A2Q96QD8 506 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZFYVE21Q9BQ24 234 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 KLHL28Q9NXS3 571 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 EXOSC1Q9Y3B2 195 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC22A7Q9Y694 548 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SCN3AQ9NY46 2000 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 LOC105369274A0A096LPK9 316 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 LOC102723532A0A0G2JNH3 316 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 KCNK2O95069 426 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CCNYL3P0C7X3 344 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 THEGLP0DJG4 465 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CPMP14384 443 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 RPS19P39019 145 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 NXPH1P58417 271 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CD300CQ08708 224 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ST3GAL3Q11203 375 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 HLA-BQ31612 363 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 STPG1Q5TH74 334 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ACSM5Q6NUN0 579 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC27A4Q6P1M0 643 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 RASSF6Q6ZTQ3 369 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 PRICKLE2Q7Z3G6 844 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 BCDIN3DQ7Z5W3 292 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 OR4N5Q8IXE1 308 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 OR4N4Q8N0Y3 316 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms