RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FMO6PO60774 539 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF19P17023 458 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CR2P20023 1033 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 HOXD13P35453 343 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 HSD17B7P56937 341 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SH3BP2P78314 561 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GPR142Q7Z601 462 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TANKQ92844 425 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TSSK2Q96PF2 358 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ATG10Q9H0Y0 220 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CHRDQ9H2X0 955 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TDRD15B5MCY1 1934 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PLATP00750 562 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR2T7P0C7T2 308 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 LTB4RQ15722 352 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 YIF1BQ5BJH7 314 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 STEAP3Q658P3 488 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF425Q6IV72 752 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR2T27Q8NH04 317 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RAB3CQ96E17 227 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GABARAPL3Q9BY60 117 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RSPH9Q9H1X1 276 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RNF215Q9Y6U7 377 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TFPTP0C1Z6 253 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OPRD1P41143 372 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TPMTP51580 245 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GRIK5Q16478 980 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM244Q5VVB8 128 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SLC35F3Q8IY50 421 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM185AQ8NFB2 350 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR56B2PQ8NGI1 322 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TREX1Q9NSU2 369 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ERVK13-1Q9NX77 482 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 BET1O15155 118 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DDCP20711 480 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RAB28P51157 221 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SOX10P56693 466 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ACTR1AP61163 376 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZBTB37Q5TC79 503 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SLC46A3Q7Z3Q1 461 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 NLGN2Q8NFZ4 835 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PGLYRP2Q96PD5 576 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DUSP21Q9H596 190 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 EPHX3Q9H6B9 360 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 NENFQ9UMX5 172 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF281Q9Y2X9 895 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZCWPW2A0A1B0GU75 182 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 A0A1B0GUH1 482 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 NIPSNAP2O75323 286 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 NDUFB2O95178 105 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TAS2R38P59533 333 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RPL23AP62750 156 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 MS4A2Q01362 244 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CHRNEQ04844 493 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ITPRIPL2Q3MIP1 535 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZMAT1Q5H9K5 638 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PPP1R11O60927 126 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ATP1B1P05026 303 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF43P17038 809 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 JUNDP17535 347 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CCR9P51686 369 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 UBXN2BQ14CS0 331 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PCGF3Q3KNV8 242 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 UNC50Q53HI1 259 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 B3GLCTQ6Y288 498 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OIT3Q8WWZ8 545 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 AMDHD1Q96NU7 426 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 MCHR1Q99705 422 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 C1orf123Q9NWV4 160 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GSKIPQ9P0R6 139 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CPSF4LA6NMK7 179 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 E5RGE8 158 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CLEC3AO75596 197 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SDHBP21912 280 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CXCL9Q07325 125 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 GPR155Q7Z3F1 870 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 TMPRSS12Q86WS5 348 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 FAM83FQ8NEG4 500 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 FAM174AQ8TBP5 190 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 FERD3LQ96RJ6 166 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OCSTAMPQ9BR26 566 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 CPED1A4D0V7 1026 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OLFM2O95897 454 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DIO3P55073 304 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 KRBOX4Q5JUW0 171 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 OR5L2Q8NGL0 311 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RBPMSQ93062 196 aaKnown RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 DGAT2Q96PD7 388 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ADAP2Q9NPF8 381 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 RPS10P5Q9NQ39 176 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 EQTNQ9NQ60 294 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 SACM1LQ9NTJ5 587 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 PSORS1C1Q9UIG5 152 aa6.22□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF107Q9UII5 783 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-202ENST00000357162 MOKQ9UQ07 419 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms