RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SCO2O43819 266 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 CDC40O60508 579 aaKnown RBP eCLIP12.84□□□□□ -0.355e-7■■■□□ 15.4
LSS-201ENST00000356396 NUDT14O95848 222 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 SAGP10523 405 aaPredicted RBP12.84□□□□□ -0.35
LSS-201ENST00000356396 MAKP20794 623 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 UGT2B15P54855 530 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 FOXK1P85037 733 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 ZXDAP98168 799 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 ZNF773Q6PK81 442 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 THSD4Q6ZMP0 1018 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 SLC41A3Q96GZ6 507 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 UCK2Q9BZX2 261 aa12.84□□□□□ -0.35
LSS-201ENST00000356396 TP53BP1Q12888 1972 aaPredicted RBP12.83□□□□□ -0.35
LSS-201ENST00000356396 FREM3P0C091 2139 aa12.83□□□□□ -0.35
LSS-201ENST00000356396 LY6G6EA0A0G2JKS1 128 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 DVL2O14641 736 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 DUX1O43812 170 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 BMP10O95393 424 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 TP53P04637 393 aaPredicted RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 RPS27P42677 84 aaKnown RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 ZNF136P52737 540 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 RPS18P62269 152 aaKnown RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 ESRRGP62508 458 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 HSD11B2P80365 405 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 EPS8Q12929 822 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 SNAPC1Q16533 368 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 MED25Q71SY5 747 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 PEX5LQ8IYB4 626 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 KDM8Q8N371 416 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 ZDHHC12Q96GR4 267 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 PITHD1Q9GZP4 211 aaPredicted RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 TPK1Q9H3S4 243 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 MAPRE3Q9UPY8 281 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 AP3M1Q9Y2T2 418 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 U3KQA8 63 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 DOCK7Q96N67 2140 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 SLC16A6O15403 523 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 GLB1P16278 677 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 ZNF10P21506 573 aaPredicted RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 LIMS1P48059 325 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 POU6F2P78424 691 aaPredicted RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 ZC3H12BQ5HYM0 836 aaKnown RBP12.83□□□□□ -0.36
LSS-201ENST00000356396 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 PMS2CLQ68D20 193 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 EDAQ92838 391 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 HRASLS5Q96KN8 279 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 THSD1Q9NS62 852 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 DNAJC13O75165 2243 aa12.83□□□□□ -0.36
LSS-201ENST00000356396 ABCB7O75027 752 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 REM1O75628 298 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 TRMUO75648 421 aaKnown RBP12.82□□□□□ -0.36
LSS-201ENST00000356396 ITGA2P17301 1181 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 GGT2P36268 569 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 SLC35A2P78381 396 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 BHLHB9Q6PI77 547 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 PLEKHG7Q6ZR37 379 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 OR5M1Q8NGP8 315 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 LRR1Q96L50 414 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 NDC1Q9BTX1 674 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 EML6Q6ZMW3 1958 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 AHCYL1O43865 530 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 UGT2B11O75310 529 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 STX11O75558 287 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 ATP1B1P05026 303 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 IFI30P13284 250 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 EPHA8P29322 1005 aaPredicted RBP12.82□□□□□ -0.36
LSS-201ENST00000356396 GRPRP30550 384 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 ENTPD1P49961 510 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 KCTD21Q4G0X4 260 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 APLFQ8IW19 511 aaPredicted RBP12.82□□□□□ -0.36
LSS-201ENST00000356396 SLC34A3Q8N130 599 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 TANKQ92844 425 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 APOL4Q9BPW4 351 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 TSSK6Q9BXA6 273 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 VN1R1Q9GZP7 353 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 GALNT9Q9HCQ5 603 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 PILRBQ9UKJ0 227 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 ADAM18Q9Y3Q7 739 aa12.82□□□□□ -0.36
LSS-201ENST00000356396 TPRP12270 2363 aaKnown RBP12.82□□□□□ -0.36
LSS-201ENST00000356396 SOCS6O14544 535 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 HPRP00739 348 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 PCMT1P22061 227 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 MXD1Q05195 221 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 DIO2Q92813 273 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 CHCHD6Q9BRQ6 235 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 OR51V1Q9H2C8 321 aa12.81□□□□□ -0.36
LSS-201ENST00000356396 PIGUQ9H490 435 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms