RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 NKX1-2Q9UD57 310 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 RPS6KA6Q9UK32 745 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 LRCH1Q9Y2L9 728 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 C15orf41Q9Y2V0 281 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ASB4Q9Y574 426 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MDC1Q14676 2089 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MYO1GB0I1T2 1018 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 H0Y3Z8 333 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 H0YGG7 62 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 CXCR6O00574 342 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 GSTA4O15217 222 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PROM1O43490 865 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PDE9AO76083 593 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PRSS23O95084 383 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 NADKO95544 446 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 AGR2O95994 175 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 FHP07954 510 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 TCN1P20061 433 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 FASP25445 335 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MPIP34949 423 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 RORAP35398 523 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 CDKN2CP42773 168 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MAGEA2P43356 314 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MVDP53602 400 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PLA2G16P53816 162 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ARF3P61204 181 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 HBA1P69905 142 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MAP4K2Q12851 820 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 GAB1Q13480 694 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 NCF4Q15080 339 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 RGNQ15493 299 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ATP6AP1Q15904 470 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MUM1Q2TAK8 710 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 DCAF10Q5QP82 559 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 GCNT6Q5T4J0 391 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 SAXO2Q658L1 398 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 GLYATQ6IB77 296 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 FBXO42Q6P3S6 717 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF793Q6ZN11 406 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF621Q6ZSS3 439 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 CCDC80Q76M96 950 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MRGPRGQ86SM5 289 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ANKRD46Q86W74 232 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 RNF148Q8N7C7 305 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 SLC38A9Q8NBW4 561 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 OR8K5Q8NH50 307 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 OR10A6Q8NH74 314 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 UTP15Q8TED0 518 aaKnown RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 RASSF5Q8WWW0 418 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 DNAJC9Q8WXX5 260 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 TANKQ92844 425 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PMM1Q92871 262 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MIEF2Q96C03 454 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF501Q96CX3 271 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 C14orf79Q96F83 325 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 CENPNQ96H22 339 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 FER1L6-AS2Q96M78 137 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 RDH12Q96NR8 316 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 IP6K3Q96PC2 410 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 SLC35A5Q9BS91 424 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 INPP5KQ9BT40 448 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 AICDAQ9GZX7 198 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PCDHAC1Q9H158 963 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 Q9H521 79 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 IKZF5Q9H5V7 419 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 ZBTB20Q9HC78 741 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 A4GALTQ9NPC4 353 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 DCAF13Q9NV06 445 aaKnown RBP6.44□□□□□ -1.38
VPS13A-201ENST00000355766 UTS2RQ9UKP6 389 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 DAPP1Q9UN19 280 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 PLCL2Q9UPR0 1127 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 CSAG2Q9Y5P2 127 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 MED13LQ71F56 2210 aa6.44□□□□□ -1.38
VPS13A-201ENST00000355766 NIPBLQ6KC79 2804 aaeCLIP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 A0A087WV62 115 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 RNF103-CHMP3A0A140T963 221 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 TTC36A6NLP5 189 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 H0YIG0 161 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 SAP18O00422 153 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 PLOD2O00469 737 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GALR3O60755 368 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 NSA2O95478 260 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 AIFM1O95831 613 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 C6orf47O95873 294 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 IGHEP01854 428 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ATP1B1P05026 303 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GUSBP08236 651 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CYC1P08574 325 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF888P0CJ79 500 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CSNK2A2P19784 350 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 ATP6V1C1P21283 382 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CDH3P22223 829 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 CERS1P27544 350 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 OTX2P32243 289 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GALNSP34059 522 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 GABRA4P48169 554 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 KHKP50053 298 aa6.43□□□□□ -1.38
VPS13A-201ENST00000355766 MANFP55145 182 aaKnown RBP6.43□□□□□ -1.38
VPS13A-201ENST00000355766 OR4D2P58180 307 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms