RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 KCTD12Q96CX2 325 aaKnown RBP17.66■□□□□ 0.42
PRPF39-201ENST00000355765 SLC22A12Q96S37 553 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF69Q9UC07 566 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 GLS2Q9UI32 602 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 NTNG1Q9Y2I2 539 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 A0A0C4DFX4 3053 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF98A6NK75 572 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 INPPL1O15357 1258 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 ARPC5O15511 151 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 UBL3O95164 117 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 C1GALT1C1LP0DN25 315 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 RAB3AP20336 220 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 NFYAP23511 347 aaPredicted RBP17.66■□□□□ 0.42
PRPF39-201ENST00000355765 F8A1P23610 371 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 GATMP50440 423 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF783Q6ZMS7 281 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 RRM2BQ7LG56 351 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 MRGPREQ86SM8 312 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 OR2AP1Q8NGE2 309 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 GNPDA2Q8TDQ7 276 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 OR5P2Q8WZ92 322 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 LYSMD1Q96S90 227 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 KLF16Q9BXK1 252 aaPredicted RBP17.66■□□□□ 0.42
PRPF39-201ENST00000355765 MARK1Q9P0L2 795 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 EXOGQ9Y2C4 368 aaKnown RBP17.66■□□□□ 0.42
PRPF39-201ENST00000355765 PRELID3BQ9Y3B1 194 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 TMEM189-UBE2V1I3L0A0 370 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 DNASE2O00115 360 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 FOXE1O00358 373 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 FGF2P09038 288 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 MMP15P51511 669 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 OC90Q02509 493 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 HLXQ14774 488 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 TAF1CQ15572 869 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 CDC73Q6P1J9 531 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 SLITRK4Q8IW52 837 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 C17orf47Q8NEP4 570 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 OR5W2Q8NH69 310 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 BBS10Q8TAM1 723 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 P2RX2Q9UBL9 471 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ZMAT5Q9UDW3 170 aaKnown RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 PRRC2BQ5JSZ5 2229 aaKnown RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 MCRIP1C9JLW8 97 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 LINC01387J3KSC0 135 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 HOXB3P14651 431 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 CCR8P51685 355 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 HACD4Q5VWC8 232 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 HIST2H2AA3Q6FI13 130 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 FAAP20Q6NZ36 180 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 Q6ZVL8 140 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF454Q8N9F8 522 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 OR10H4Q8NGA5 316 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ATOH1Q92858 354 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 TTTY10Q9BZA0 68 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 SLC6A15Q9H2J7 730 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ICKQ9UPZ9 632 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 REM1O75628 298 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 RB1P06400 928 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 MRPL3P09001 348 aaKnown RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ALPPL2P10696 532 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 ATF1P18846 271 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 C4BPBP20851 252 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 HTR1FP30939 366 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 RNF144AP50876 292 aaPredicted RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 DEFA5Q01523 94 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 TSPAN31Q12999 210 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 PLBD1Q6P4A8 553 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 CLRN3Q8NCR9 226 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 SLAIN1Q8ND83 568 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 VOPP1Q96AW1 172 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 TIMP4Q99727 224 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 PCDHGA9Q9Y5G4 932 aaKnown RBP17.65■□□□□ 0.42
PRPF39-201ENST00000355765 BACE2Q9Y5Z0 518 aa17.65■□□□□ 0.42
PRPF39-201ENST00000355765 SUSD5O60279 629 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 ADRB1P08588 477 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 RAG2P55895 527 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 SEZ6L2Q6UXD5 910 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 SPATA5L1Q9BVQ7 753 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 ACTR6Q9GZN1 396 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 SEMA4GQ9NTN9 838 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 NTMQ9P121 344 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 PIP5K1CO60331 668 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 PAICSP22234 425 aaKnown RBP17.64■□□□□ 0.41
PRPF39-201ENST00000355765 CD70P32970 193 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 PSMA6P60900 246 aaKnown RBP17.64■□□□□ 0.41
PRPF39-201ENST00000355765 TMEM173Q86WV6 379 aaPredicted RBP17.64■□□□□ 0.41
PRPF39-201ENST00000355765 LRRC56Q8IYG6 542 aaPredicted RBP17.64■□□□□ 0.41
PRPF39-201ENST00000355765 ACBD7Q8N6N7 88 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 ABHD4Q8TB40 342 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 SORCS1Q8WY21 1168 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 C19orf43Q9BQ61 176 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 EFCAB11Q9BUY7 163 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 SLC6A17Q9H1V8 727 aa17.64■□□□□ 0.41
PRPF39-201ENST00000355765 GPR55Q9Y2T6 319 aaPredicted RBP17.64■□□□□ 0.41
PRPF39-201ENST00000355765 LAMA3Q16787 3333 aa17.63■□□□□ 0.41
PRPF39-201ENST00000355765 LDOC1O95751 146 aaPredicted RBP17.63■□□□□ 0.41
PRPF39-201ENST00000355765 CHRM4P08173 479 aa17.63■□□□□ 0.41
PRPF39-201ENST00000355765 ANXA7P20073 488 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms