RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 HENMT1Q5T8I9 393 aaKnown RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 LRRC69Q6ZNQ3 347 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 TMEM200AQ86VY9 491 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 TBC1D21Q8IYX1 336 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 ZNF511Q8NB15 262 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 SNAPC3Q92966 411 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 MARC2Q969Z3 335 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 REXO5Q96IC2 774 aaKnown RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 CXorf58Q96LI9 332 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 THSD1Q9NS62 852 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 COMMD3Q9UBI1 195 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 DNMT3LQ9UJW3 386 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 KLK13Q9UKR3 277 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 TRHDEQ9UKU6 1024 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 STX7O15400 261 aaKnown RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 DXOO77932 396 aaKnown RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 ATF1P18846 271 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 MOGAT2Q3SYC2 334 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 PLEKHS1Q5SXH7 462 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 CCNYL2Q5T2Q4 361 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 C9orf64Q5T6V5 341 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 UBE2R2Q712K3 238 aaPredicted RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 THAP5Q7Z6K1 395 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 FLVCR1-AS1Q8TAF5 88 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 SLC7A6Q92536 515 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 CDKL2Q92772 493 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GIMAP5Q96F15 307 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 PYURFQ96I23 114 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 ZNF681Q96N22 645 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GPR63Q9BZJ6 419 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 FAM192AQ9GZU8 254 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 FKBP14Q9NWM8 211 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 KIAA1257Q9ULG3 409 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 SLC5A10A0PJK1 596 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 IGLON5A6NGN9 336 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 MPOP05164 745 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 UROSP10746 265 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 ELK1P19419 428 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GSTM2P28161 218 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GDI1P31150 447 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 FRKP42685 505 aaPredicted RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 CXCL12P48061 93 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 MAPKAPK2P49137 400 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 SRSF1Q07955 248 aaKnown RBP eCLIP5.17□□□□□ -1.58
CD47-201ENST00000355354 LGALS3BPQ08380 585 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 MGAT2Q10469 447 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 ITPRIPL2Q3MIP1 535 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 LGALSLQ3ZCW2 172 aaPredicted RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 FRG2Q64ET8 278 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 PGBD2Q6P3X8 592 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 CBLL1Q75N03 491 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 OR51Q1Q8NH59 317 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 XAGE5Q8WWM1 108 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 EXOSC8Q96B26 276 aaKnown RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 CMBLQ96DG6 245 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
CD47-201ENST00000355354 DACH2Q96NX9 599 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 FRG2BQ96QU4 278 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 EGFL8Q99944 293 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
CD47-201ENST00000355354 PRR19A6NJB7 356 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 SLC9B1P1A6NJY1 282 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 AQP12BA6NM10 295 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PATE3B3GLJ2 98 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LEFTY2O00292 366 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 CPNE3O75131 537 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 LYPD3O95274 346 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 DUS4LO95620 317 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 EIF4EP06730 217 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 RAP2AP10114 183 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 BSGP35613 385 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 MPLP40238 635 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 MAP2K6P52564 334 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 MAT1AQ00266 395 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 TMEM115Q12893 351 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 RTP5Q14D33 572 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PDGFRLQ15198 375 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 XKR6Q5GH73 641 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 RNLSQ5VYX0 342 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PTCHD4Q6ZW05 846 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 PLEKHM3Q6ZWE6 761 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ZNF554Q86TJ5 538 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 AMIGO1Q86WK6 493 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 AQP12AQ8IXF9 295 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 YIPF7Q8N8F6 280 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 OR51A2Q8NGJ7 313 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 OR5J2Q8NH18 312 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 LRR1Q96L50 414 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 TRIB1Q96RU8 372 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 SOSTQ9BQB4 213 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 MRPS26Q9BYN8 205 aaKnown RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 GPN2Q9H9Y4 310 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 NEK6Q9HC98 313 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 MRGBPQ9NV56 204 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 ATXN7L1Q9ULK2 861 aaPredicted RBP5.16□□□□□ -1.58
CD47-201ENST00000355354 TEX51A0A1B0GUA7 166 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 KDELR3O43731 214 aa5.16□□□□□ -1.58
CD47-201ENST00000355354 SCO2O43819 266 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms