RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZXDBP98169 803 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 MAP4K2Q12851 820 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 FCN2Q15485 313 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CD276Q5ZPR3 534 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 C1orf94Q6P1W5 598 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 PRTFDC1Q9NRG1 225 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 PLGP00747 810 aaPredicted RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADH5P11766 374 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 BPIP17213 487 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 PGCP20142 388 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 SGSHP51688 502 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 BTG1P62324 171 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF280BQ86YH2 543 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CNTN4Q8IWV2 1026 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 C3orf30Q96M34 536 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC16A6O15403 523 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADAM12O43184 909 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HLA-AP01891 365 aaKnown RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HOXB9P17482 250 aaPredicted RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CRHR2Q13324 411 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 MLIPQ5VWP3 458 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 SERPINA12Q8IW75 414 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CD200R1Q8TD46 325 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 RNF141Q8WVD5 230 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 DPF3Q92784 378 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 SAMD10Q9BYL1 202 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CXADRP78310 365 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 BMFQ96LC9 184 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 WDR77Q9BQA1 342 aaPredicted RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 STRA6Q9BX79 667 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 DPH1Q9BZG8 443 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPATCH2Q9NW75 528 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 LATO43561 262 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HTD2P86397 168 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HYAL2Q12891 473 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF551Q7Z340 670 aaPredicted RBP12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 CMTM8Q8IZV2 173 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 NTMT1Q9BV86 223 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HHATLQ9HCP6 504 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 C2orf42Q9NWW7 574 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 IL20RAQ9UHF4 553 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 VEGFDO43915 354 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 PIM1P11309 404 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 M6PRP20645 277 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 DDCP20711 480 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SEC13P55735 322 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 C3orf38Q5JPI3 329 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 IGSF8Q969P0 613 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 CENPOQ9BU64 300 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MSRAQ9UJ68 235 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPR39O43194 453 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MT-CO2P00403 227 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC2A5P22732 501 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 FLT3LGP49771 235 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ERVFC1P60507 584 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 UBE2KP61086 200 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 RSU1Q15404 277 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPR139Q6DWJ6 353 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 NIPAL3Q6P499 406 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MAMDC2Q7Z304 686 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC35B4Q969S0 331 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZMYND19Q96E35 227 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 LRIG1Q96JA1 1093 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 C4orf36Q96KX1 117 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 GSX2Q9BZM3 304 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC25A18Q9H1K4 315 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 UFSP2Q9NUQ7 469 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC7A7Q9UM01 511 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 C17orf113A0A1B0GUU1 675 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 TCRBP04435 133 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 HLA-DMAP28067 261 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 TGM4P49221 684 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 CTXN1P60606 82 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SGCAQ16586 387 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 BAK1Q16611 211 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 TXNDC8Q6A555 127 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZC3H14Q6PJT7 736 aaKnown RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MEPCEQ7L2J0 689 aaKnown RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR4M1Q8NGD0 313 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 C20orf27Q9GZN8 174 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 FAM212BQ9NTI7 297 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 OSGIN1Q9UJX0 560 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 B3GALT1Q9Y5Z6 326 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SYT7O43581 403 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 UBL3O95164 117 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 THBS2P35442 1172 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MAGEB1P43366 347 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms