RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 UBE3DQ7Z6J8 389 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 SRFBP1Q8NEF9 429 aaKnown RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 FAM45AQ8TCE6 357 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 STARD4Q96DR4 205 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 ZBED6CLQ96FA7 236 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 CDRT15Q96T59 188 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 GON7Q9BXV9 100 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 AMBRA1Q9C0C7 1298 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 MARCH7Q9H992 704 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 ZNF701Q9NV72 531 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 WWOXQ9NZC7 414 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 ZNF490Q9ULM2 529 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 LAMP3Q9UQV4 416 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 VWA7Q9Y334 891 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 OARD1Q9Y530 152 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 DOCK7Q96N67 2140 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 CCDC160A6NGH7 325 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 A8MV72 311 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 EVPLLA8MZ36 301 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 PLOD2O00469 737 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 SOX30O94993 753 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TGM6O95932 706 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TGFB1P01137 390 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 PAX1P15863 534 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 CHMP24386 653 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 LOXP28300 417 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 TLX1P31314 330 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 CXCR5P32302 372 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 SLC6A12P48065 614 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 RPS4XP62701 263 aaKnown RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 IFITM2Q01629 132 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 DOC2AQ14183 400 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 SLC29A2Q14542 456 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TSNQ15631 228 aaKnown RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 NPTX1Q15818 432 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 HIST2H2ACQ16777 129 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 EXOC3L2Q2M3D2 409 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 HP1BP3Q5SSJ5 553 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 OGFRL1Q5TC84 451 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 HIST2H2AA3Q6FI13 130 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 ALKBH2Q6NS38 261 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 ZNF474Q6S9Z5 364 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 GPR141Q7Z602 305 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 IFNEQ86WN2 208 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 CLVS1Q8IUQ0 354 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 RELL1Q8IUW5 271 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 ICA1LQ8NDH6 482 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 MCUQ8NE86 351 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TANKQ92844 425 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 REXO5Q96IC2 774 aaKnown RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 ZNF845Q96IR2 970 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 VPS39Q96JC1 886 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 SIGLEC10Q96LC7 697 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 PELOQ9BRX2 385 aaKnown RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 G6PC3Q9BUM1 346 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 OSBPL11Q9BXB4 747 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 PITHD1Q9GZP4 211 aaPredicted RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 RMND5AQ9H871 391 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 ACTR8Q9H981 624 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 S100A14Q9HCY8 104 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 DNAJC11Q9NVH1 559 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 TAS2R1Q9NYW7 299 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 GPRC5BQ9NZH0 403 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 KLRF1Q9NZS2 232 aa10.12□□□□□ -0.79
RTN3-204ENST00000354497 MTO1Q9Y2Z2 717 aaKnown RBP10.12□□□□□ -0.79
RTN3-204ENST00000354497 GLOD5A6NK44 160 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 WIPF1O43516 503 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 TMCC2O75069 709 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 PLAUP00749 431 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 CLPSP04118 112 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 EPB42P16452 691 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 IDUAP35475 653 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 CDKL1Q00532 357 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 TNFRSF17Q02223 184 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 BIKQ13323 160 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 SELPLGQ14242 412 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 SQLEQ14534 574 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 ZNF460Q14592 562 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 NNATQ16517 81 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 BEX5Q5H9J7 111 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 PAGE2BQ5JRK9 111 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 OR2A2Q6IF42 318 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 NANOGP8Q6NSW7 305 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 ADGRE4PQ86SQ3 457 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 WFDC8Q8IUA0 241 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 KLHL7Q8IXQ5 586 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 UBQLNLQ8IYU4 475 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 NKAPQ8N5F7 415 aaKnown RBP10.11□□□□□ -0.79
RTN3-204ENST00000354497 NATD1Q8N6N6 113 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 OR10Z1Q8NGY1 313 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 GRPEL2Q8TAA5 225 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 GTPBP3Q969Y2 492 aaKnown RBP10.11□□□□□ -0.79
RTN3-204ENST00000354497 RHBDF1Q96CC6 855 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 TRMT61AQ96FX7 289 aaKnown RBP10.11□□□□□ -0.79
RTN3-204ENST00000354497 CFAP36Q96G28 342 aa10.11□□□□□ -0.79
RTN3-204ENST00000354497 MARK4Q96L34 752 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms