RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GIMAP5Q96F15 307 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MAGED4Q96JG8 741 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 HRASLS5Q96KN8 279 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 MS4A4EQ96PG1 132 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 DOK1Q99704 481 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TREX2Q9BQ50 279 aaPredicted RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 RIBC2Q9H4K1 309 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 C3orf14Q9HBI5 128 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 CCNB1IP1Q9NPC3 277 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PAPOLBQ9NRJ5 636 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 ACER3Q9NUN7 267 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 RSL24D1Q9UHA3 163 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 FBXW2Q9UKT8 454 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 DAPP1Q9UN19 280 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 LIPT1Q9Y234 373 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 KLHL20Q9Y2M5 609 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 FAM32AQ9Y421 112 aaKnown RBP7.62□□□□□ -1.19
CD44-205ENST00000352818 TESMINQ9Y4I5 508 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 PCDHGB1Q9Y5G3 927 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 GMPPBQ9Y5P6 360 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 SLC22A7Q9Y694 548 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 ZNF780BQ9Y6R6 833 aa7.62□□□□□ -1.19
CD44-205ENST00000352818 TGP01266 2768 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 A0A0J9YVX5 310 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TRIM64BA6NI03 449 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 A6NL46 340 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 H0YGG7 62 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 FAAHO00519 579 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 PRKRAO75569 313 aaKnown RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 CCNB2O95067 398 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 GADD45GO95257 159 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ANGPTL1O95841 491 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ADAP00813 363 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 STATHP02808 62 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 HMGN2P05204 90 aaKnown RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 OR12D1P0DN82 309 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 IL7RP16871 459 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TNFRSF1BP20333 461 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 CBLP22681 906 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 CPN2P22792 545 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 DCKP27707 260 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 GGT2P36268 569 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 GPR3P46089 330 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 CDH12P55289 794 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ARF3P61204 181 aaPredicted RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 ROR2Q01974 943 aaKnown RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 HHEXQ03014 270 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 CDK5R2Q13319 367 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 MAD2L1BPQ15013 274 aaPredicted RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 GPR19Q15760 415 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 SYPL1Q16563 259 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 MEP1AQ16819 746 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 DUSP7Q16829 419 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 EXOC3L2Q2M3D2 409 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 RPS26P11Q5JNZ5 115 aaPredicted RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 EXOSC6Q5RKV6 272 aaKnown RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 SNAP47Q5SQN1 464 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 MLIPQ5VWP3 458 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 FAM180BQ6P0A1 224 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TMEM107Q6UX40 140 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 GALNT5Q7Z7M9 940 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 OR2L13Q8N349 312 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 LRRC25Q8N386 305 aaPredicted RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 ARHGEF39Q8N4T4 335 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 OR13F1Q8NGS4 319 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ADAMTS17Q8TE56 1095 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 IPCEF1Q8WWN9 437 aaPredicted RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 ELP4Q96EB1 424 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TRNT1Q96Q11 434 aaKnown RBP7.61□□□□□ -1.19
CD44-205ENST00000352818 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 MACROD1Q9BQ69 325 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 FUZQ9BT04 418 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 PINK1Q9BXM7 581 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ACTRT3Q9BYD9 372 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ULBP3Q9BZM4 244 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 CHRNA10Q9GZZ6 450 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 HRASLS2Q9NWW9 162 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 GIN1Q9NXP7 522 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 PTGFRNQ9P2B2 879 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TNFRSF10DQ9UBN6 386 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 SPACA6W5XKT8 324 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 ZANQ9Y493 2812 aa7.61□□□□□ -1.19
CD44-205ENST00000352818 TRBV23OR9-2A0A075B6M9 112 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 A0A087WV62 115 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 LOC105369274A0A096LPK9 316 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 LOC102723532A0A0G2JNH3 316 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 GLOD5A6NK44 160 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 DUXAA6NLW8 204 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 WASHC1A8K0Z3 465 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 RHPN2P1A8MT19 583 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 POLR1CO15160 346 aaPredicted RBP7.6□□□□□ -1.19
CD44-205ENST00000352818 GALR3O60755 368 aaPredicted RBP7.6□□□□□ -1.19
CD44-205ENST00000352818 SEC14L2O76054 403 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 ATP1B1P05026 303 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 CHRM4P08173 479 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 HTR1AP08908 422 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 NR2F1P10589 423 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 EDN3P14138 238 aa7.6□□□□□ -1.19
CD44-205ENST00000352818 POLR2IP36954 125 aaKnown RBP7.6□□□□□ -1.19
CD44-205ENST00000352818 YAP1P46937 504 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms