RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 SERTAD3Q9UJW9 196 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 FREM2Q5SZK8 3169 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 SH3D21A4FU49 640 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 SLC28A2O43868 658 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 TIAF1O95411 115 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 PTTG1O95997 202 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 RHCEP18577 417 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 STX4Q12846 297 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 DOC2BQ14184 412 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 DUSP7Q16829 419 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 FAM214AQ32MH5 1076 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 DESI1Q6ICB0 168 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 RHBDD1Q8TEB9 315 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 SLC9A6Q92581 669 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 DPYSL5Q9BPU6 564 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 NDC1Q9BTX1 674 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 CHRNA10Q9GZZ6 450 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 CLN6Q9NWW5 311 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 CNOT2Q9NZN8 540 aaKnown RBP12.47□□□□□ -0.41
UBA3-201ENST00000349511 SEMA5BQ9P283 1151 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 ITGB1BP2Q9UKP3 347 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
UBA3-201ENST00000349511 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 HRKO00198 91 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 OR10H2O60403 315 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 NR2F1P10589 423 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 POU1F1P28069 291 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 SOX6P35712 828 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 TMEM64Q6YI46 380 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 AKAP14Q86UN6 197 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 CLIP4Q8N3C7 705 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 SLC16A11Q8NCK7 471 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 OR4D9Q8NGE8 314 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
UBA3-201ENST00000349511 GIMAP5Q96F15 307 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 OR7D2Q96RA2 312 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 GFM1Q96RP9 751 aaKnown RBP12.46□□□□□ -0.41
UBA3-201ENST00000349511 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.41
UBA3-201ENST00000349511 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 QRSL1Q9H0R6 528 aaKnown RBP12.46□□□□□ -0.41
UBA3-201ENST00000349511 APMAPQ9HDC9 416 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 PRTFDC1Q9NRG1 225 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 ENOPH1Q9UHY7 261 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 ZNF318Q5VUA4 2279 aa12.46□□□□□ -0.41
UBA3-201ENST00000349511 EP300Q09472 2414 aaPredicted RBP12.46□□□□□ -0.41
UBA3-201ENST00000349511 CCRL2O00421 344 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.42
UBA3-201ENST00000349511 MPZL2O60487 215 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 IFNW1P05000 195 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 SKP1P63208 163 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 FUT5Q11128 374 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.42
UBA3-201ENST00000349511 SSX1Q16384 188 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 PRICKLE4Q2TBC4 344 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 MINDY4Q4G0A6 757 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 GPAT3Q53EU6 434 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 ZNF628Q5EBL2 1059 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 VWA2Q5GFL6 755 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 PLAG1Q6DJT9 500 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 ZNF770Q6IQ21 691 aaPredicted RBP12.46□□□□□ -0.42
UBA3-201ENST00000349511 BHLHB9Q6PI77 547 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 SAMD14Q8IZD0 417 aaPredicted RBP12.46□□□□□ -0.42
UBA3-201ENST00000349511 TAGAPQ8N103 731 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 CARFQ8N187 725 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.42
UBA3-201ENST00000349511 KCNS3Q9BQ31 491 aa12.46□□□□□ -0.42
UBA3-201ENST00000349511 KIF26BQ2KJY2 2108 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 ARRDC5A6NEK1 342 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 FFAR1O14842 300 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 ATP1B1P05026 303 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 GSTT2P0CG29 244 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 GSTT2BP0CG30 244 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 ETV6P41212 452 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 SLC15A1P46059 708 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 KHKP50053 298 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 BCL2A1Q16548 175 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 CCBE1Q6UXH8 406 aaPredicted RBP12.45□□□□□ -0.42
UBA3-201ENST00000349511 SHISA6Q6ZSJ9 500 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 TMEM151BQ8IW70 566 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 SLC38A9Q8NBW4 561 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 SFXN5Q8TD22 340 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
UBA3-201ENST00000349511 CTRCQ99895 268 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 TREX2Q9BQ50 279 aaPredicted RBP12.45□□□□□ -0.42
UBA3-201ENST00000349511 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
UBA3-201ENST00000349511 A4GALTQ9NPC4 353 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms