RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RHDQ02161 417 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 CD226Q15762 336 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 NDUFAF6Q330K2 333 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 MTX3Q5HYI7 312 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 ABHD17BQ5VST6 288 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 FNDC7Q5VTL7 733 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 DHRS4L2Q6PKH6 230 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 LACC1Q8IV20 430 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 TMEM156Q8N614 296 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF614Q8N883 585 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 GATSQ8NAP1 163 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 POGLUT1Q8NBL1 392 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 CANT1Q8WVQ1 401 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 PMM1Q92871 262 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 ARSGQ96EG1 525 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 PYURFQ96I23 114 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 PINK1Q9BXM7 581 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 SH2D2AQ9NP31 389 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 RPS6KA6Q9UK32 745 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 TNRC6AQ8NDV7 1962 aaKnown RBP17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 PCNX3Q9H6A9 2034 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 ZZEF1O43149 2961 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 FRS3O43559 492 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 HS6ST1O60243 411 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 CEACAM4O75871 244 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 WDPCPO95876 746 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 SEMG1P04279 462 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 FESP07332 822 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 THBS1P07996 1170 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 NID1P14543 1247 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 IL7RP16871 459 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 PRKAR1BP31321 381 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 EVI2BP34910 448 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 CD96P40200 585 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 HLCSP50747 726 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 KCNJ10P78508 379 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 ELOAQ14241 798 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 FGFBP1Q14512 234 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 MRPL2Q5T653 305 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 IRAK1BP1Q5VVH5 260 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 MDGA2Q7Z553 956 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 MARCH3Q86UD3 253 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 APOBEC4Q8WW27 367 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 CNOT9Q92600 299 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 SEPHS2Q99611 448 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 DOHHQ9BU89 302 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 SPATA5L1Q9BVQ7 753 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 HOXD1Q9GZZ0 328 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 ADPRHL2Q9NX46 363 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 SAMD4AQ9UPU9 718 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 IFT52Q9Y366 437 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 DTNAQ9Y4J8 743 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 HRH3Q9Y5N1 445 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 CHCHD2Q9Y6H1 151 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 CHD6Q8TD26 2715 aa17.41■□□□□ 0.38
CHMP4A-201ENST00000347519 DHRS12A0PJE2 317 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 C2orf72A6NCS6 295 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 SERINC4A6NH21 518 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 SCO2O43819 266 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 IFNA14P01570 189 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 NGFRP08138 427 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 CCL3P10147 92 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 OR1E2P47887 323 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TMED10P49755 219 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 GAS1P54826 345 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TUBA3CQ13748 450 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 LIN52Q52LA3 116 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 AGAP7PQ5VUJ5 663 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TUBA3EQ6PEY2 450 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ISLR2Q6UXK2 745 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TSEN54Q7Z6J9 526 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 RBM45Q8IUH3 476 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 PYDC1Q8WXC3 89 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TTC9Q92623 222 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 RSRC1Q96IZ7 334 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 RNF145Q96MT1 663 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 AGAP4Q96P64 663 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 KLHDC3Q9BQ90 382 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 PROK2Q9HC23 129 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 HPF1Q9NWY4 346 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TEKT2Q9UIF3 430 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ANAPC2Q9UJX6 822 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 RALYQ9UKM9 306 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 CNOT11Q9UKZ1 510 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 LAMA5O15230 3695 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 B4DXG7 233 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ALG1L2C9J202 215 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 M0R3H8 397 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 SCDO00767 359 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 KRT36O76013 467 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 LGI1O95970 557 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 MT-ND1P03886 318 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TMPRSS3P57727 454 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 MFAP5Q13361 173 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 LARS2Q15031 903 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 RNF220Q5VTB9 566 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 LSRQ86X29 649 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 CYP4Z2PQ8N1L4 340 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 NTNG2Q96CW9 530 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 TMCO6Q96DC7 493 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms