RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SAMD14Q8IZD0 417 aaPredicted RBP15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 GHDCQ8N2G8 530 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 LINC00471Q8N535 108 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF222Q9UK12 451 aa15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 HELZP42694 1942 aaKnown RBP15.46■□□□□ 0.07
CDC42EP4-201ENST00000335793 AKAP8O43823 692 aaKnown RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 UBXN7O94888 489 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC2A10O95528 541 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 MAT2AP31153 395 aaKnown RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 CTBP2P56545 445 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 TUSC1Q2TAM9 212 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 ANKRD54Q6NXT1 300 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR4N5Q8IXE1 308 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 KLHL36Q8N4N3 616 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 SPRYD4Q8WW59 207 aaPredicted RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR51V1Q9H2C8 321 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 DDX31Q9H8H2 851 aaKnown RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 SEMA4GQ9NTN9 838 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 TNFRSF10DQ9UBN6 386 aa15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 GPR55Q9Y2T6 319 aaPredicted RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.06
CDC42EP4-201ENST00000335793 IRGMA1A4Y4 181 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 LRIT2A6NDA9 550 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 FABP7O15540 132 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 FGF19O95750 216 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 DRD2P14416 443 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 AHRP35869 848 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 P2RY2P41231 377 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC1A3P43003 542 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 CLDN2P57739 230 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 CAMK1Q14012 370 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 LRRC32Q14392 662 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 MZT2AQ6P582 158 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 UBE3DQ7Z6J8 389 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 LINC01555Q8NAE3 123 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR8D4Q8NGM9 314 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 ARSGQ96EG1 525 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 SGTBQ96EQ0 304 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 INSM2Q96T92 566 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC6A17Q9H1V8 727 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 MAN2C1Q9NTJ4 1040 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 TBX21Q9UL17 535 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 MGAT4AQ9UM21 535 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZFR2Q9UPR6 939 aaKnown RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 FCMRO60667 390 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 GNRH1P01148 92 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 TRIM23P36406 574 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 EPHA5P54756 1037 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 PPP3R1P63098 170 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 BTN3A2P78410 334 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 PRDX1Q06830 199 aaKnown RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 LTB4RQ15722 352 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 CPOQ8IVL8 374 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 BBS1Q8NFJ9 593 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF431Q8TF32 576 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 LINC00615Q96LM1 132 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 CAMK1GQ96NX5 476 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 WDR26Q9H7D7 661 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF624Q9P2J8 865 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 PLEKHM1Q9Y4G2 1056 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 UNC80Q8N2C7 3258 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 HEATR5BQ9P2D3 2071 aa15.45■□□□□ 0.06
CDC42EP4-201ENST00000335793 A0A1W2PR48 441 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 POM121CA8CG34 1229 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 LINC00587B1AMM8 73 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 LALBAP00709 142 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 CISD3P0C7P0 127 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 HSD17B2P37059 387 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 REEP5Q00765 189 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 ASAH1Q13510 395 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR10H4Q8NGA5 316 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR52H1Q8NGJ2 320 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 CNRIP1Q96F85 164 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 HHIPL1Q96JK4 782 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 WDFY2Q96P53 400 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR7D2Q96RA2 312 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZSCAN32Q9NX65 697 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 A0A0G2JPF8 293 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 HNRNPCL3B7ZW38 293 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 TOXO94900 526 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 LIMS3P0CW19 117 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 LIMS4P0CW20 117 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 HNRNPCL4P0DMR1 293 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 GABRA5P31644 462 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 CDK5Q00535 292 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 GLYR1Q49A26 553 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 METRNLQ641Q3 311 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 LRFN4Q6PJG9 635 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 TEX261Q6UWH6 196 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 IL20RBQ6UXL0 311 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 SAMD8Q96LT4 415 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF416Q9BWM5 594 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 TINAGL1Q9GZM7 467 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 PCDHB16Q9NRJ7 776 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 EXTL2Q9UBQ6 330 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 TESQ9UGI8 421 aaKnown RBP15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 U3KQ87 197 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 CARNS1A5YM72 827 aa15.44■□□□□ 0.06
CDC42EP4-201ENST00000335793 PLA2G10O15496 165 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms