RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 MRPS18CQ9Y3D5 142 aaKnown RBP13.51□□□□□ -0.25
KATNA1-201ENST00000335643 IGLV3-32A0A0A0MS00 114 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 RNF103-CHMP3A0A140T963 221 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 E9PBE3 544 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 H0YC42 278 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 HOXD4P09016 255 aaPredicted RBP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 CPN1P15169 458 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 IGFBP2P18065 325 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 TBXA2RP21731 343 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 PTGER4P35408 488 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 ZNF136P52737 540 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 TPD52P55327 224 aaPredicted RBP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 CLDN15P56746 228 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 DCST2Q5T1A1 773 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 NSUN5P2Q63ZY6 315 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 ARSKQ6UWY0 536 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 C6orf120Q7Z4R8 191 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 ADGRE4PQ86SQ3 457 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 ZNF295-AS1Q8N0V1 137 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 RELL2Q8NC24 303 aaPredicted RBP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 PIWIL2Q8TC59 973 aaKnown RBP13.5□□□□□ -0.25
KATNA1-201ENST00000335643 ENKD1Q9H0I2 346 aa13.5□□□□□ -0.25
KATNA1-201ENST00000335643 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 OIP5O43482 229 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CPSF4O95639 269 aaKnown RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 NGFRP08138 427 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 ZNF708P17019 499 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 HK1P19367 917 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MSX1P28360 303 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CDKN2CP42773 168 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 C17orf67Q0P5P2 114 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 SPATA19Q7Z5L4 167 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 LACC1Q8IV20 430 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MCEMP1Q8IX19 187 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 ZPLD1Q8TCW7 415 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 ADAMTS15Q8TE58 950 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MOAP1Q96BY2 351 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 TREX2Q9BQ50 279 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 FAF1Q9UNN5 650 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 ZNF337Q9Y3M9 751 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 OTOGQ6ZRI0 2925 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CENPVL1A0A0U1RR11 272 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 PRSS51A0A1B0GVH4 220 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 OR2M5A3KFT3 312 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MBD3L4A6NDZ8 208 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MBD3L3A6NE82 208 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MBD3L5A6NJ08 208 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 NDUFB5O43674 189 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 COX6B1P14854 86 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CHMP24386 653 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 TIMP3P35625 211 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CLK3P49761 638 aaKnown RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 AGFG1P52594 562 aaKnown RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 CLNS1AP54105 237 aaKnown RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 RAET1LQ5VY80 246 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 AAGABQ6PD74 315 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 ENPP6Q6UWR7 440 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 HDXQ7Z353 690 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MBD3L2Q8NHZ7 208 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 SH3YL1Q96HL8 342 aaPredicted RBP13.49□□□□□ -0.25
KATNA1-201ENST00000335643 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 INPP5KQ9BT40 448 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 KCNJ16Q9NPI9 418 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 UBQLN4Q9NRR5 601 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 KCNE5Q9UJ90 142 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
KATNA1-201ENST00000335643 MED12LQ86YW9 2145 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 CD8B2A6NJW9 211 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 CLCA1A8K7I4 914 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 NPIPB9F8W1W9 429 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 SLCO1B7G3V0H7 640 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 H0Y3Z8 333 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 FCMRO60667 390 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 MATN1P21941 496 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 BMP5P22003 454 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 SUCLG1P53597 346 aaKnown RBP13.48□□□□□ -0.25
KATNA1-201ENST00000335643 FUT5Q11128 374 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 FOXF2Q12947 444 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 SNTB1Q13884 538 aaKnown RBP13.48□□□□□ -0.25
KATNA1-201ENST00000335643 GANABQ14697 944 aaKnown RBP13.48□□□□□ -0.25
KATNA1-201ENST00000335643 TMEM44Q2T9K0 475 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 NDUFAF6Q330K2 333 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 CBLN3Q6UW01 205 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 MEX3BQ6ZN04 569 aaKnown RBP13.48□□□□□ -0.25
KATNA1-201ENST00000335643 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 ZNF524Q96C55 264 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 C7orf26Q96N11 449 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 OR51I1Q9H343 314 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 VIPAS39Q9H9C1 493 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 CLCF1Q9UBD9 225 aa13.48□□□□□ -0.25
KATNA1-201ENST00000335643 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms