RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GATAD2BQ8WXI9 593 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 CCDC115Q96NT0 180 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 KCND3Q9UK17 655 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.08□□□□□ -0.16
C9orf47-201ENST00000334490 IER3IP1Q9Y5U9 82 aa14.08□□□□□ -0.16
C9orf47-201ENST00000334490 PRAMEF33A0A0G2JMD5 474 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 PLRG1O43660 514 aaKnown RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 PRAMEF10O60809 474 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 BMP2P12643 396 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 EPHA4P54764 986 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ARPC4P59998 168 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 MANEAQ5SRI9 462 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 SLC18B1Q6NT16 456 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 MEX3DQ86XN8 651 aaKnown RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 CPOQ8IVL8 374 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF611Q8N823 705 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 GALNT6Q8NCL4 622 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ELF4Q99607 663 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 TREX2Q9BQ50 279 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 LMF2Q9BU23 707 aaKnown RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF639Q9UID6 485 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 BOKQ9UMX3 212 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 RNF215Q9Y6U7 377 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 LAMB2P55268 1798 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ASCC3Q8N3C0 2202 aaKnown RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 NUDT7P0C024 238 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 RRADP55042 308 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 PIP5KL1Q5T9C9 394 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF782Q6ZMW2 699 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 FTCDNL1E5RQL4 147 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 EEF1A1P68104 462 aaKnown RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 LTB4RQ15722 352 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 OCLNQ16625 522 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF404Q494X3 552 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ANKDD1AQ495B1 522 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 C4orf46Q504U0 113 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 PRAMEF20Q5VT98 475 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 TRIM46Q7Z4K8 759 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 OR8J2Q8NGG1 315 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 BPIFA2Q96DR5 249 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ATG4BQ9Y4P1 393 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 TMEM201Q5SNT2 666 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 SHFQ7M4L6 423 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 TECPR1Q7Z6L1 1165 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ZFP41Q8N8Y5 198 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 ACOT11Q8WXI4 607 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-201ENST00000334490 VN1R3Q9BXE9 311 aa14.07□□□□□ -0.16
C9orf47-201ENST00000334490 NARSO43776 548 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 FURINP09958 794 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 HNRNPA0Q13151 305 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 AGBL4Q5VU57 503 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 TMEM64Q6YI46 380 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ASRGL1Q7L266 308 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SYT13Q7L8C5 426 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 C12orf43Q96C57 262 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 OR10A5Q9H207 317 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 A0A1W2PPW3 197 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SHISA7A6NL88 538 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 GABRG2P18507 467 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 NKAPLQ5M9Q1 402 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 LINC00696Q6ZRV3 163 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 TIGD4Q8IY51 512 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 GALNT15Q8N3T1 639 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 NANOS1Q8WY41 292 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF707Q96C28 371 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 UTP23Q9BRU9 249 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF443Q9Y2A4 671 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 CSNK1G3Q9Y6M4 447 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 A0A0X1KG70 313 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 hCG_1807616A0A1W2PRN6 198 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 UBFD1O14562 309 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 CTNSO60931 367 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ARAFP10398 606 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 HTR3AP46098 478 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 POU3F4P49335 361 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 TM4SF18Q96CE8 201 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SPHK1Q9NYA1 384 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SATB2Q9UPW6 733 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 COL4A1P02462 1669 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 A0A1B0GX78 115 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 SLITRK5O94991 958 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 CRABP1P29762 137 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 GLP1RP43220 463 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 WBP2NLQ6ICG8 309 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 IGFN1Q86VF2 1251 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ADGRG5Q8IZF4 528 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 LIN28AQ9H9Z2 209 aaKnown RBP14.06□□□□□ -0.16
C9orf47-201ENST00000334490 CDH20Q9HBT6 801 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 TMEM9Q9P0T7 183 aa14.06□□□□□ -0.16
C9orf47-201ENST00000334490 LOC100509620A0A075B734 347 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms