RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GCAP28676 217 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PRDX3P30048 256 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PSMB3P49720 205 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CASP7P55210 303 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OPN5Q6U736 354 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OR52H1Q8NGJ2 320 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GGHQ92820 318 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 POLMQ9NP87 494 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF223Q9UK11 482 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3DA0A087WVF3 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3IA0A087WXS9 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3EA0A087X179 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3KA0A087X1G2 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3FA6NER0 549 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3LB9A6J9 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KIAA0355O15063 1070 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MAS1P04201 325 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3HP0C7X1 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SMIM6P0DI80 62 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TSFMP43897 325 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 EMX1Q04741 257 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MAP4K2Q12851 820 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OPCMLQ14982 345 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PLK5Q496M5 336 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3GQ6DHY5 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3CQ6IPX1 549 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 NRSN1Q8IZ57 195 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TBC1D3Q8IZP1 549 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 C1orf127Q8N9H9 656 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 IL17RDQ8NFM7 739 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OR5T1Q8NG75 326 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 C12orf57Q99622 126 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CRB3Q9BUF7 120 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 IL21RQ9HBE5 538 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 UPK3BL1B0FP48 263 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 UPK3BL2E5RIL1 263 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 LY86O95711 162 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SELENOWP63302 87 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RGNQ15493 299 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TIGD5Q53EQ6 642 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 FAM124AQ86V42 546 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RNF113BQ8IZP6 322 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GCNT2Q8N0V5 402 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SMPDL3BQ92485 455 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 NIT2Q9NQR4 276 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 C1GALT1Q9NS00 363 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OLAHQ9NV23 265 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MOKQ9UQ07 419 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RNF11Q9Y3C5 154 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 C9JVG2 144 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 AGRPO00253 132 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CPN1P15169 458 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 HLA-FP30511 346 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 BDH1Q02338 343 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SFRP4Q6FHJ7 346 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GDPD4Q6W3E5 623 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 REM2Q8IYK8 340 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM151AQ8N4L1 468 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OR9I1Q8NGQ6 314 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 NETO1Q8TDF5 533 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 METTL7AQ9H8H3 244 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 LSM5Q9Y4Y9 91 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM72A0PK05 275 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KITLGP21583 273 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TGM1P22735 817 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RNF144AP50876 292 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM244Q5VVB8 128 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CFAP77Q6ZQR2 320 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CLEC20AQ6ZU45 233 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SLC24A5Q71RS6 500 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SLC7A5P1Q8MH63 180 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF582Q96NG8 517 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 FAM83CQ9BQN1 747 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PARPBPQ9NWS1 579 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 DDTLA6NHG4 134 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CLN5O75503 358 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KCNK5O95279 499 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 EEF1A1P68104 462 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OXA1LQ15070 435 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SGCBQ16585 318 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 EEF1A1P5Q5VTE0 462 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OR51T1Q8NGJ9 327 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PGAM5Q96HS1 289 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SIGLEC10Q96LC7 697 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 UBL7Q96S82 380 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SUV39H2Q9H5I1 410 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SPHK1Q9NYA1 384 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GMEB2Q9UKD1 530 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PDHXO00330 501 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MRPL3P09001 348 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LILRA4P59901 499 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GTDC1Q4AE62 458 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 FAM69BQ5VUD6 431 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ZCCHC10Q8TBK6 192 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TRMT2BQ96GJ1 504 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR8D2Q9GZM6 311 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 DUSP22Q9NRW4 184 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TAC3Q9UHF0 121 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM221A6NGB7 291 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 FABP1P07148 127 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms