RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 OR1E3Q8WZA6 343 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 TRPV4Q9HBA0 871 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 NUFIP1Q9UHK0 495 aaKnown RBP12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
TUBA1B-201ENST00000332858 LOC105369274A0A096LPK9 316 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 LOC102723532A0A0G2JNH3 316 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 B4DXG7 233 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 LDB3O75112 727 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 CPN2P22792 545 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ATP6V1E1P36543 226 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 RACK1P63244 317 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ASAH1Q13510 395 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TBRG1Q3YBR2 411 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TMEM196Q5HYL7 178 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 EOGTQ5NDL2 527 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 MBOAT2Q6ZWT7 520 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 OR4N4Q8N0Y3 316 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 LRRC25Q8N386 305 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 SRFBP1Q8NEF9 429 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TIMP4Q99727 224 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PRSS27Q9BQR3 290 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TTYH2Q9BSA4 534 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 MED18Q9BUE0 208 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 UBQLN3Q9H347 655 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 SNTNA6NMZ2 147 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 GABRPO00591 440 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PEX12O00623 359 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 HTR2AP28223 471 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TEAD1P28347 426 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 GCGRP47871 477 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TFF2Q03403 129 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PLBD1Q6P4A8 553 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ENPP7Q6UWV6 458 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 DTX3Q8N9I9 347 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 FLVCR1-AS1Q8TAF5 88 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 OSTF1Q92882 214 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 MYADMQ96S97 322 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 SDF2Q99470 211 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 ATF6BQ99941 703 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 PLSCR3Q9NRY6 295 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 GRIP1Q9Y3R0 1128 aa12.5□□□□□ -0.41
TUBA1B-201ENST00000332858 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 MAKP20794 623 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 COL9A1P20849 921 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 TBXA2RP21731 343 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 STAT5AP42229 794 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 FCRLBQ6BAA4 426 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 ASPGQ86U10 573 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 KIR3DX1Q9H7L2 352 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 GSTK1Q9Y2Q3 226 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 CDC73Q6P1J9 531 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 OR2T33Q8NG76 320 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 GAL3ST3Q96A11 431 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 OR2A5Q96R48 311 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 SLC22A4Q9H015 551 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 RNF32Q9H0A6 362 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 TMEM168Q9H0V1 697 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 PPP1R3EQ9H7J1 279 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 TRIM45Q9H8W5 580 aaPredicted RBP12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 MTHFD2LQ9H903 347 aaPredicted RBP12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 OR6C2Q9NZP2 312 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 LINC01565O15544 149 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 IDH3BO43837 385 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 EEF1A1P68104 462 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 TNFRSF17Q02223 184 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 DSG2Q14126 1118 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 OR2L13Q8N349 312 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 GDPD1Q8N9F7 314 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
TUBA1B-201ENST00000332858 OR5T3Q8NGG3 340 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms