RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 SLC45A3Q96JT2 553 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NMNAT2Q9BZQ4 307 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SCAPQ12770 1279 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PLA2G7Q13093 441 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 DHCR24Q15392 516 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 Q6ZVU0 165 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CMTM1Q8IZ96 169 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FRMD1Q8N878 549 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CSNK1G3Q9Y6M4 447 aa12.1□□□□□ -0.47
RAB11FIP1-202ENST00000330843 VNN1O95497 513 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SERPINA5P05154 406 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SERPINA2P20848 420 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MALLQ13021 153 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TESK1Q15569 626 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 B3GNT7Q8NFL0 401 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 IL1F10Q8WWZ1 152 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ZNF582Q96NG8 517 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 POM121BA6NF01 834 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 EIF3FO00303 357 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TSPYL5Q86VY4 417 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TFGQ92734 400 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SYNGR4O95473 234 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RPS18P62269 152 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FAM198AQ9UFP1 575 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 JCADQ9P266 1359 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 A0A1W2PQ09 198 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 K7ERQ8 282 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TSFMP43897 325 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SOCS6O14544 535 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PRRT3Q5FWE3 981 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ST8SIA4Q92187 359 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TMEM125Q96AQ2 219 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NIPSNAP3BQ9BS92 247 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 EXO1Q9UQ84 846 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 AQP7O14520 342 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 HSPB6O14558 160 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ARSBP15848 533 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SPCS2Q15005 226 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OGFOD3Q6PK18 319 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 C19orf35Q6ZS72 473 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OTOP2Q7RTS6 562 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 AKIRIN1Q9H9L7 192 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PADI3Q9ULW8 664 aa12.09□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TYROBPO43914 113 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 EPHA4P54764 986 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 COL13A1Q5TAT6 717 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 NRG4Q8WWG1 115 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 OPA3Q9H6K4 179 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 V9GYS6 101 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 A0A1W2PRU2 124 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 XRCC3O43542 346 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 POLR2CP19387 275 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 NTF3P20783 257 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 GUK1Q16774 197 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 CYB561A3Q8NBI2 242 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 NECAP1Q8NC96 275 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 PTGES2Q9H7Z7 377 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 VSX1Q9NZR4 365 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 ABRACLQ9P1F3 81 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 EXOGQ9Y2C4 368 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 NFS1Q9Y697 457 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SCGB1C2P0DMR2 95 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 PPP2CAP67775 309 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 PIN1Q13526 163 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 OR8J1Q8NGP2 316 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 CLCF1Q9UBD9 225 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 CEPT1Q9Y6K0 416 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SMIM35A0A1B0GVV1 85 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 FKTNO75072 461 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 S100A8P05109 93 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SERPINE2P07093 398 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SLC25A11Q02978 314 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 RELL1Q8IUW5 271 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 CLECL1Q8IZS7 167 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SLC35B2Q8TB61 432 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 TSGA13Q96PP4 275 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 PARP12Q9H0J9 701 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 ACTL8Q9H568 366 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 MAGIXQ9H6Y5 334 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 CHD4Q14839 1912 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SDHDO14521 159 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 SLC2A1P11166 492 aa12.08□□□□□ -0.48
RAB11FIP1-202ENST00000330843 MTHFD2P13995 350 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms