RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 Q9Y3F1 56 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 RBM7Q9Y580 266 aaKnown RBP13.22□□□□□ -0.29
EPHB3-201ENST00000330394 BTAF1O14981 1849 aa13.22□□□□□ -0.29
EPHB3-201ENST00000330394 METTL21EPA6NDL7 271 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 SLC9B1P1A6NJY1 282 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 UPK1AO00322 258 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TOR1AO14656 332 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 SC5DO75845 299 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 GPR176Q14439 515 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TRAM1Q15629 374 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 CDNFQ49AH0 187 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 C6orf132Q5T0Z8 1188 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 SIGIRRQ6IA17 410 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 ENPP7Q6UWV6 458 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 MSRB3Q8IXL7 192 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 NAXEQ8NCW5 288 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 OR6T1Q8NGN1 323 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 THAP4Q8WY91 577 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 IRF7Q92985 503 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 PKMYT1Q99640 499 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF700Q9H0M5 742 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 OR52D1Q9H346 318 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 GXYLT2A0PJZ3 443 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 SFTPBP07988 381 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 MAPK3P27361 379 aaPredicted RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 MMP12P39900 470 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 OR4C11Q6IEV9 310 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 CBARPQ8N350 705 aaPredicted RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 GTPBP8Q8N3Z3 284 aaPredicted RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 ZNF285Q96NJ3 590 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 OR2A14Q96R47 310 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 POLDIP3Q9BY77 421 aaKnown RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TRAV27A0A087WT01 109 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 TSPAN12O95859 305 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 AKR1C4P17516 323 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 PCMT1P22061 227 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 MC2RQ01718 297 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 ACSM5Q6NUN0 579 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 FCRLAQ7L513 359 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 GET4Q7L5D6 327 aaPredicted RBP13.21□□□□□ -0.29
EPHB3-201ENST00000330394 PTOV1Q86YD1 416 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 MMP21Q8N119 569 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 GSX2Q9BZM3 304 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
EPHB3-201ENST00000330394 ACOD1A6NK06 481 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 WRBO00258 174 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 MMP11P24347 488 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 IMPA1P29218 277 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 GRK5P34947 590 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 ACVR1Q04771 509 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 SLX4IPQ5VYV7 408 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 CYHR1Q6ZMK1 362 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.3
EPHB3-201ENST00000330394 SYT9Q86SS6 491 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 L3MBTL4Q8NA19 623 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.3
EPHB3-201ENST00000330394 KATNB1Q9BVA0 655 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 SRRQ9GZT4 340 aa13.21□□□□□ -0.3
EPHB3-201ENST00000330394 CDK5RAP2Q96SN8 1893 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 F5H5P2 479 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 PRSS23O95084 383 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SPARCP09486 303 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 GDNFP39905 211 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ERVFC1P60507 584 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CHRNEQ04844 493 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ESPNLQ6ZVH7 1005 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 GPR135Q8IZ08 494 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 OR56B4Q8NH76 319 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SMPDL3BQ92485 455 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 C16orf58Q96GQ5 468 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SLC22A12Q96S37 553 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CNN2Q99439 309 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CEP290O15078 2479 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 PCM1Q15154 2024 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 CIB4A0PJX0 185 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF878C9JN71 531 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 NFATC1O95644 943 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 ACRP10323 421 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 M6PRP20645 277 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 PGGHGQ32M88 737 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 LRFN4Q6PJG9 635 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
EPHB3-201ENST00000330394 NANOGP1Q8N7R0 232 aa13.2□□□□□ -0.3
EPHB3-201ENST00000330394 METTL21AQ8WXB1 218 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms