RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PCBP3P57721 371 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 PHC1P78364 1004 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 CBX1P83916 185 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SELENBP1Q13228 472 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 ZSCAN26Q16670 478 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF311Q5JNZ3 666 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 RPL13AP3Q6NVV1 102 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 TNFAIP8L2Q6P589 184 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SHISA6Q6ZSJ9 500 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 CBLL1Q75N03 491 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 TREML1Q86YW5 311 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SPNS2Q8IVW8 549 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 RNF113BQ8IZP6 322 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 PSD4Q8NDX1 1056 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 FAM71CQ8NEG0 241 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 STMN2Q93045 179 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SDCCAG3Q96C92 435 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 NTNG2Q96CW9 530 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 DUS3LQ96G46 650 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 ARHGDIGQ99819 225 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 USB1Q9BQ65 265 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 NAA11Q9BSU3 229 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 DOHHQ9BU89 302 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 C15orf41Q9Y2V0 281 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 FXYD1O00168 92 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 PEX1O43933 1283 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 FADS1O60427 444 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 PRKRAO75569 313 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SOX3P41225 446 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 RGS8P57771 180 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SESN3P58005 492 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 KCNJ2P63252 427 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 CSNK2A1P68400 391 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 KCNJ10P78508 379 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 ALDH6A1Q02252 535 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 KLHL26Q53HC5 615 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 LYPD8Q6UX82 237 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 DNAJC14Q6Y2X3 702 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 CDK20Q8IZL9 346 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 GHDCQ8N2G8 530 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 ZFP62Q8NB50 900 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 NFKBIDQ8NI38 313 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 SLC38A4Q969I6 547 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 NRBF2Q96F24 287 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 MYCBPQ99417 103 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 POTEKPQ9BYX7 375 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 PRRG3Q9BZD7 231 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 VCXQ9H320 206 aa4.75□□□□□ -1.65
LRIT3-201ENST00000327908 MOV10Q9HCE1 1003 aaKnown RBP4.75□□□□□ -1.65
LRIT3-201ENST00000327908 MKI67P46013 3256 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR6C65A6NJZ3 312 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 C1QTNF9BB2RNN3 333 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 WWP2O00308 870 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ETV2O00321 342 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF208O43345 1280 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 HNRNPRO43390 633 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR2T1O43869 369 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SUSD5O60279 629 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TRIM3O75382 744 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 DEAF1O75398 565 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 H6PDO95479 791 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CRHP06850 196 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 C1QTNF9P0C862 333 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CD247P20963 164 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 KCNJ5P48544 419 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 POLR2HP52434 150 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ST3GAL3Q11203 375 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TGIF1Q15583 401 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 NRF1Q16656 503 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GRAMD1BQ3KR37 738 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 FAM205BPQ63HN1 556 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GLYATQ6IB77 296 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 NPSR1Q6W5P4 371 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 FRRS1Q6ZNA5 592 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PIWIL3Q7Z3Z3 882 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GRINAQ7Z429 371 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 RETREG3Q86VR2 466 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 FADS6Q8N9I5 356 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 RBM15BQ8NDT2 890 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ADPRHL1Q8NDY3 354 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR10A6Q8NH74 314 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 THAP3Q8WTV1 239 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 DDIT4LQ96D03 193 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TEX37Q96LM6 180 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MESP1Q9BRJ9 268 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 KLHL4Q9C0H6 718 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC24A3Q9HC58 644 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CD300AQ9UGN4 299 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TMCC3Q9ULS5 477 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 HDGFL3Q9Y3E1 203 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF175Q9Y473 711 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MRPS18BQ9Y676 258 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ARRDC5A6NEK1 342 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 AQP7O14520 342 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 HPNP05981 417 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ETFAP13804 333 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 EDN3P14138 238 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms