RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 BLKP51451 505 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 CD300CQ08708 224 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 PUS10Q3MIT2 529 aaKnown RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 AKIRIN2Q53H80 203 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 PAQR6Q6TCH4 344 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 QSOX2Q6ZRP7 698 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 OLIG3Q7RTU3 272 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF296Q8WUU4 475 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 KCTD12Q96CX2 325 aaKnown RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 ZMYND19Q96E35 227 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 OR10A4Q9H209 315 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 SLC52A3Q9NQ40 469 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 AK6Q9Y3D8 172 aaKnown RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 WASH3PC4AMC7 463 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 RNGTTO60942 597 aaKnown RBP13.83□□□□□ -0.2
TCOF1-201ENST00000323668 CSN2P05814 226 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 UCHL1P09936 223 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 IGFALSP35858 605 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 FAM205BPQ63HN1 556 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 B3GLCTQ6Y288 498 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 PRSS58Q8IYP2 241 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 OR52E1Q8NGJ3 308 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 SMPDL3BQ92485 455 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 OR51B4Q9Y5P0 310 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TRBV5-3A0A0A0MS03 114 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TMEM129A0AVI4 362 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 A6NL46 340 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 SYT5O00445 386 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 FMO6PO60774 539 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TYRP1P17643 537 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 FAPQ12884 760 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 ASAH1Q13510 395 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 Q6ZNB5 142 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 MMP21Q8N119 569 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 WDR92Q96MX6 357 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 TRPV4Q9HBA0 871 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 NDUFB11Q9NX14 153 aa13.83□□□□□ -0.2
TCOF1-201ENST00000323668 C2orf74A8MZ97 194 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 NDUFB2O95178 105 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 CRYZL1O95825 349 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 AIFM1O95831 613 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 TNFP01375 233 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 RRAS2P62070 204 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 HYAL2Q12891 473 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KIF18BQ86Y91 864 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 G6PC3Q9BUM1 346 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 SRA1Q9HD15 236 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 IFT46Q9NQC8 304 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 USP36Q9P275 1121 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 POLHQ9Y253 713 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KANTRA0A1W2PQU2 76 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ARSBP15848 533 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF24P17028 368 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ATP5A1P25705 553 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 GIFP27352 417 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 NNATQ16517 81 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 SAXO2Q658L1 398 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 FIGLAQ6QHK4 219 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 TPRA1Q86W33 373 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 JAGN1Q8N5M9 183 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 C4orf36Q96KX1 117 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 FYTTD1Q96QD9 318 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ALOXE3Q9BYJ1 711 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 HOXD1Q9GZZ0 328 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 MKRN2Q9H000 416 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 FZD3Q9NPG1 666 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 INPP5EQ9NRR6 644 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 PNO1Q9NRX1 252 aaKnown RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KLHL9Q9P2J3 617 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 RABL2AQ9UBK7 228 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KLHL21Q9UJP4 597 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 RABL2BQ9UNT1 228 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 WASHC1A8K0Z3 465 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 A8MUA0 341 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 BMPR1AP36894 532 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ETV5P41161 510 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ETV1P50549 477 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 SCGB2B2Q4G0G5 96 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ACSM5Q6NUN0 579 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 IL20RBQ6UXL0 311 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF619Q8N2I2 560 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 PRR14Q9BWN1 585 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.82□□□□□ -0.2
TCOF1-201ENST00000323668 NIPAL2Q9H841 368 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 MSRAQ9UJ68 235 aa13.82□□□□□ -0.2
TCOF1-201ENST00000323668 KCNE1BA0A087WTH5 132 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ARRDC5A6NEK1 342 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SLC43A1O75387 559 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 RP2O75695 350 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms