RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 BARHL1Q9BZE3 327 aa17■□□□□ 0.31
SHISA3-201ENST00000319234 MOV10Q9HCE1 1003 aaKnown RBP17■□□□□ 0.31
SHISA3-201ENST00000319234 GRIP1Q9Y3R0 1128 aa17■□□□□ 0.31
SHISA3-201ENST00000319234 A0A087WV62 115 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 BCAT2O15382 392 aaPredicted RBP16.99■□□□□ 0.31
SHISA3-201ENST00000319234 EPPINO95925 133 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 ALPPP05187 535 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 IFI6P09912 130 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 PSPHP78330 225 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 BNC1Q01954 994 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 RAB40BQ12829 278 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 MRGPREQ86SM8 312 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 IQCF1Q8N6M8 205 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 CLDN22Q8N7P3 220 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 SLC16A11Q8NCK7 471 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 LRR1Q96L50 414 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 PRRG3Q9BZD7 231 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
SHISA3-201ENST00000319234 PRDM6Q9NQX0 595 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 UCKL1Q9NWZ5 548 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
SHISA3-201ENST00000319234 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 CHST10O43529 356 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 MYL12AP19105 171 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 NT5EP21589 574 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 AFF3P51826 1226 aaKnown RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 EPHA4P54764 986 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 SKP1P63208 163 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TRMT12Q53H54 448 aaKnown RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ZNF311Q5JNZ3 666 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 HMGN2P46Q86SG4 172 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 IL17RDQ8NFM7 739 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TMEM163Q8TC26 289 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 GNPDA2Q8TDQ7 276 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ASB15Q8WXK1 588 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ANKRD9Q96BM1 317 aaPredicted RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ANKRD19PQ9H560 264 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 V9GYH0 126 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 GON4LQ3T8J9 2241 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TMEM129A0AVI4 362 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 RHPN2P1A8MT19 583 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 RGS5O15539 181 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 PRODHO43272 600 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 PLOD3O60568 738 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ACP2P11117 423 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 PPM1FP49593 454 aaPredicted RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 WNT4P56705 351 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 DMWDQ09019 674 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 AGAP6Q5VW22 663 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 SIMC1Q8NDZ2 872 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TEX47Q8TBZ9 253 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 SLC9A6Q92581 669 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 CDS1Q92903 461 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 SLC25A46Q96AG3 418 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 ZNF285Q96NJ3 590 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 AGAP4Q96P64 663 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TGM7Q96PF1 710 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 CTRCQ99895 268 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 MED18Q9BUE0 208 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 RAB33BQ9H082 229 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 QRSL1Q9H0R6 528 aaKnown RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TRIM45Q9H8W5 580 aaPredicted RBP16.98■□□□□ 0.31
SHISA3-201ENST00000319234 SNTG1Q9NSN8 517 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 EPHA6Q9UF33 1036 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 PLCL2Q9UPR0 1127 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 CMAHPQ9Y471 501 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 TMEM131Q92545 1883 aa16.98■□□□□ 0.31
SHISA3-201ENST00000319234 PRUNE2Q8WUY3 3088 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 A0A0A6YYC8 382 aaPredicted RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 I3L1I5 382 aaPredicted RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 GABRA4P48169 554 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 PDX1P52945 283 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 GFERP55789 205 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 LARS2Q15031 903 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 SNAPC1Q16533 368 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 PRICKLE4Q2TBC4 344 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 ARHGAP11BQ3KRB8 267 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 EXOSC6Q5RKV6 272 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 LIPKQ5VXJ0 399 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 ACSM5Q6NUN0 579 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 BCDIN3DQ7Z5W3 292 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 FAM181AQ8N9Y4 354 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 TRMT61AQ96FX7 289 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 IER2Q9BTL4 223 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 CHRNA10Q9GZZ6 450 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 TXNL4BQ9NX01 149 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 ERVK13-1Q9NX77 482 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 TBC1D24Q9ULP9 559 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 EXOSC1Q9Y3B2 195 aaKnown RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 KNL1Q8NG31 2342 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 MLLT3P42568 568 aaPredicted RBP16.97■□□□□ 0.31
SHISA3-201ENST00000319234 MGAT2Q10469 447 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 DUSP5Q16690 384 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 MINDY4Q4G0A6 757 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 ZNF544Q6NX49 715 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 SLC27A4Q6P1M0 643 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 ZCCHC12Q6PEW1 402 aa16.97■□□□□ 0.31
SHISA3-201ENST00000319234 VRK2Q86Y07 508 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms