RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 H3F3CQ6NXT2 135 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CLEC9AQ6UXN8 241 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF730Q6ZMV8 503 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ASB18Q6ZVZ8 466 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TSPAN33Q86UF1 283 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF321PQ8N8H1 164 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZSCAN1Q8NBB4 408 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RELL2Q8NC24 303 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 OR4C15Q8NGM1 316 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ACOT11Q8WXI4 607 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ORAI1Q96D31 301 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CHFRQ96EP1 664 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MED8Q96G25 268 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PGLYRP2Q96PD5 576 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TSPAN10Q9H1Z9 355 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SLC38A1Q9H2H9 487 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PIGMQ9H3S5 423 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 LHX9Q9NQ69 397 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 C1orf109Q9NX04 203 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MARCH4Q9P2E8 410 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CARHSP1Q9Y2V2 147 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ANKRD12Q6UB98 2062 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MUC22E2RYF6 1773 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 FAM86C2PA6NEL3 165 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NPIPB9F8W1W9 429 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RFXAPO00287 272 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CXCR6O00574 342 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 AQP8O94778 261 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NSA2O95478 260 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PLGP00747 810 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SLC2A1P11166 492 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PEPDP12955 493 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PCGF2P35227 344 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GGT2P36268 569 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SLC6A12P48065 614 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 DIO3P55073 304 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF460Q14592 562 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TOMM34Q15785 309 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CDKN3Q16667 212 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF789Q5FWF6 425 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 C10orf91Q5T1B1 145 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ATPAF1Q5TC12 328 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PTRHD1Q6GMV3 140 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ETFRF1Q6IPR1 90 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GPR153Q6NV75 609 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CD300LDQ6UXZ3 194 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CMIPQ8IY22 773 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SYNPOQ8N3V7 929 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SYT14Q8NB59 555 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM185AQ8NFB2 350 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM40Q8WWA1 233 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RFKQ969G6 155 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 C7orf34Q96L11 122 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF385AQ96PM9 386 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ATG101Q9BSB4 218 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CHIAQ9BZP6 476 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 BCO1Q9HAY6 547 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NLGN3Q9NZ94 848 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 KIAA1549LQ6ZVL6 1849 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM72A0PK05 275 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 DLEU1O43261 78 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 MBTPS2O43462 519 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PIP5K1CO60331 668 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 FZD7O75084 574 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 CD2P06729 351 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PAX1P15863 534 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 UGT2B7P16662 529 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 RCC1P18754 421 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 BDKRB1P46663 353 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 CSNK1EP49674 416 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 DIO1P49895 249 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 IL2P60568 153 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 BLOC1S1P78537 153 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 SRSF11Q05519 484 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PLA2G7Q13093 441 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OLIG2Q13516 323 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OR2T5Q6IEZ7 315 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PAPD4Q6PIY7 484 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 DEF8Q6ZN54 512 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ZDHHC21Q8IVQ6 265 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 C15orf54Q8N8G6 183 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 GPR26Q8NDV2 337 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 Q8NFD4 153 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 B3GNT7Q8NFL0 401 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OR2T29Q8NH02 315 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OR56A3Q8NH54 315 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 CSGALNACT1Q8TDX6 532 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OSTF1Q92882 214 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 HMCESQ96FZ2 354 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ARL6Q9H0F7 186 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM38AQ9H6F2 299 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TMPRSS4Q9NRS4 437 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 RNF19AQ9NV58 838 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 FAM86C1Q9NVL1 165 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TXNL4BQ9NX01 149 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 NDUFB11Q9NX14 153 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 POFUT2Q9Y2G5 429 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 MRPS23Q9Y3D9 190 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms