RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR13C4Q8NGS5 318 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 OR9A4Q8NGU2 314 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 DDIT4LQ96D03 193 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ABCB9Q9NP78 766 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF281Q9Y2X9 895 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 VSTM2BA6NLU5 285 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 F10P00742 488 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 IFI30P13284 250 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 RFX2P48378 723 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ATXN1P54253 815 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SPCS2Q15005 226 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 CTU2Q2VPK5 515 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 PRSS55Q6UWB4 352 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 THAP7Q9BT49 309 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 TTC34A8MYJ7 566 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 E9PI62 339 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 STBD1O95210 358 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GALTP07902 379 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FLT3LGP49771 235 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 CDHR3Q6ZTQ4 885 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 BCL2L14Q9BZR8 327 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 DMRT3Q9NQL9 472 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ELOVL2Q9NXB9 296 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 DOPEY2Q9Y3R5 2298 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 F5H0A9 414 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ACOT8O14734 319 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 YKT6O15498 198 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GPR39O43194 453 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GABRB3P28472 473 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 CDKN2CP42773 168 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ALG10BQ5I7T1 473 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FAM26EQ8N5C1 309 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GLIS1Q8NBF1 620 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SLC46A1Q96NT5 459 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SEC61A2Q9H9S3 476 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 RBPJLQ9UBG7 517 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FBXW2Q9UKT8 454 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 NFKBIEO00221 500 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 MAN2B1O00754 1011 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SLC5A2P31639 672 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SELENOVP59797 346 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 BTN3A2P78410 334 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 BCL2L15Q5TBC7 163 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 WBP2NLQ6ICG8 309 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FRMPD2BQ6IN97 320 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF595Q8IYB9 648 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ACVR1CQ8NER5 493 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 NEK7Q8TDX7 302 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 TTC9Q92623 222 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FXYD6Q9H0Q3 95 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SFXN1Q9H9B4 322 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 HIF3AQ9Y2N7 669 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SHOXO15266 292 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 INPPL1O15357 1258 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ELOCQ15369 112 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SMARCD3Q6STE5 483 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 CYP4V2Q6ZWL3 525 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 C19orf12Q9NSK7 152 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 C2orf42Q9NWW7 574 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GBAP04062 536 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 DOC2AQ14183 400 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MLC1Q15049 377 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 DUSP7Q16829 419 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 OR5W2Q8NH69 310 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 EME2A4GXA9 379 aaPredicted RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM88BA6NKF7 163 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SLCO2B1O94956 709 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 YPEL5P62699 121 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MXD1Q05195 221 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PDE7AQ13946 482 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SGPP2Q8IWX5 399 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PARP16Q8N5Y8 322 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 NANPQ8TBE9 248 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 BABAM2Q9NXR7 383 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PGAP2Q9UHJ9 254 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 AQP9O43315 295 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HCRTR2O43614 444 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HTR3BO95264 441 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ELK1P19419 428 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SLC35A2P78381 396 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PIM3Q86V86 326 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CADM2Q8N3J6 435 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 C16orf78Q8WTQ4 265 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 LPPQ93052 612 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 B3GNT4Q9C0J1 378 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HPF1Q9NWY4 346 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PCDHB10Q9UN67 800 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PCDHGA8Q9Y5G5 932 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CYB5BO43169 146 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms