RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SMARCD3Q6STE5 483 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 NHLRC1Q6VVB1 395 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 COMMD6Q7Z4G1 85 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 OR11G2Q8NGC1 345 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 OR5T2Q8NGG2 359 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 FOXJ1Q92949 421 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 FAIM2Q9BWQ8 316 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 NKX6-2Q9C056 277 aaPredicted RBP16.88■□□□□ 0.29
SPSB4-201ENST00000310546 NANSQ9NR45 359 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 A4GNTQ9UNA3 340 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 PLCL2Q9UPR0 1127 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 PGRMC2O15173 223 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 MTX2O75431 263 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 SPDEFO95238 335 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 TGM6O95932 706 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 TGFB1P01137 390 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 RAB3BP20337 219 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 SMIM11AP58511 58 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 B4GALNT1Q00973 533 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 LGALS3BPQ08380 585 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 FGL1Q08830 312 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 RIPPLY1Q0D2K3 151 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 LTB4RQ15722 352 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 SLC30A6Q6NXT4 461 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 ARL9Q6T311 187 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 KRT78Q8N1N4 520 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 RELL2Q8NC24 303 aaPredicted RBP16.88■□□□□ 0.29
SPSB4-201ENST00000310546 BBS1Q8NFJ9 593 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 GANCQ8TET4 914 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 GCDHQ92947 438 aaPredicted RBP16.88■□□□□ 0.29
SPSB4-201ENST00000310546 WBP2Q969T9 261 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 CRISPLD2Q9H0B8 497 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 BTBD1Q9H0C5 482 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 MTG2Q9H4K7 406 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 COA4Q9NYJ1 87 aa16.88■□□□□ 0.29
SPSB4-201ENST00000310546 FXYD6-FXYD2A0A087WZ82 144 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 LINC00587B1AMM8 73 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 ANHXE9PGG2 379 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 ARPC1BO15143 372 aaKnown RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 SPAM1P38567 509 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 MEOX2P50222 304 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 MC2RQ01718 297 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 LYPLAL1Q5VWZ2 237 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 ZNF322Q6U7Q0 402 aaPredicted RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 SERPINA13PQ6UXR4 307 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 OLIG3Q7RTU3 272 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 OR4D9Q8NGE8 314 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 ZNF354BQ96LW1 612 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 FXYD6Q9H0Q3 95 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 CXorf36Q9H7Y0 433 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 CNIH4Q9P003 139 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 NFKBIL1Q9UBC1 381 aaPredicted RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 PURGQ9UJV8 347 aaKnown RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 LRRN3E7EW58 273 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 CLDN11O75508 207 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 XPAP23025 273 aaPredicted RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 RAD52P43351 418 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 E2F1Q01094 437 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 RING1Q06587 406 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 KCTD12Q96CX2 325 aaKnown RBP16.87■□□□□ 0.29
SPSB4-201ENST00000310546 LRRN3Q9H3W5 708 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 BRF2Q9HAW0 419 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 RCE1Q9Y256 329 aa16.87■□□□□ 0.29
SPSB4-201ENST00000310546 H0YIV9 168 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SGTAO43765 313 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 UBL3O95164 117 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SNRPBP14678 240 aaKnown RBP16.86■□□□□ 0.29
SPSB4-201ENST00000310546 EN2P19622 333 aaPredicted RBP16.86■□□□□ 0.29
SPSB4-201ENST00000310546 GDNFP39905 211 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 MMP15P51511 669 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 IKBIPQ70UQ0 350 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 TMUB2Q71RG4 321 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SZRD1Q7Z422 152 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SYT9Q86SS6 491 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 COMTD1Q86VU5 262 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 POGLUT1Q8NBL1 392 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 OR51G2Q8NGK0 314 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SLC22A12Q96S37 553 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SLC6A16Q9GZN6 736 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 DDX31Q9H8H2 851 aaKnown RBP16.86■□□□□ 0.29
SPSB4-201ENST00000310546 MIEF1Q9NQG6 463 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 LHX3Q9UBR4 397 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 CA5BQ9Y2D0 317 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 CHD5Q8TDI0 1954 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 A0A1W2PPK0 400 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 EGFP01133 1207 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 GAAP10253 952 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 ACP5P13686 325 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SLC11A2P49281 568 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 GK2Q14410 553 aaPredicted RBP16.86■□□□□ 0.29
SPSB4-201ENST00000310546 TMEM255AQ5JRV8 349 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 METTL11BQ5VVY1 283 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 ORAI3Q9BRQ5 295 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SLC6A5Q9Y345 797 aa16.86■□□□□ 0.29
SPSB4-201ENST00000310546 SLC38A8A6NNN8 435 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms