RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 GATSQ8NAP1 163 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DNAJA4Q8WW22 397 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 TRMT61AQ96FX7 289 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 BARHL1Q9BZE3 327 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 IL23AQ9NPF7 189 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 EXO1Q9UQ84 846 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 FKBP7Q9Y680 259 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SPTBN5Q9NRC6 3674 aaKnown RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 EDDM13A0A1B0GTR0 161 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 QSOX1O00391 747 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 FAAHO00519 579 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 GPR37L1O60883 481 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 HK1P19367 917 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 NT5EP21589 574 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 ADH7P40394 386 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 STAT5AP42229 794 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 KIAA1211LQ6NV74 962 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 CRIPAKQ8N1N5 446 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 KATNB1Q9BVA0 655 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 KCNE3Q9Y6H6 103 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 STON1Q9Y6Q2 735 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 POM121BA6NF01 834 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 FAM171A2A8MVW0 826 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 MAGEB4O15481 346 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 LATS1O95835 1130 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 HBQ1P09105 142 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 APEHP13798 732 aaKnown RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 HES5Q5TA89 166 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 TECPR1Q7Z6L1 1165 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 SLC9B2Q86UD5 537 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 ZFAND1Q8TCF1 268 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 ZFPM2Q8WW38 1151 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 MCHR1Q99705 422 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 FOLH1BQ9HBA9 442 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 PHPT1Q9NRX4 125 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 SNRPBP14678 240 aaKnown RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 MAGEA2P43356 314 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 OMPP47874 163 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 SEC23BQ15437 767 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 OTPQ5XKR4 325 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 FAHD1Q6P587 224 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 LINC00299Q6ZSB3 139 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 KLHDC8AQ8IYD2 350 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 OR52I1Q8NGK6 324 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 CHTF18Q8WVB6 975 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 RLN3Q8WXF3 142 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 C7orf34Q96L11 122 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 SAMD8Q96LT4 415 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 TREX2Q9BQ50 279 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 RANBP3Q9H6Z4 567 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 KRCC1Q9NPI7 259 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-201ENST00000309428 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 RPS6KB2Q9UBS0 482 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 ATG4BQ9Y4P1 393 aa11.87□□□□□ -0.51
RETREG3-201ENST00000309428 HEATR5BQ9P2D3 2071 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 LGALS8O00214 317 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 GABRPO00591 440 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 LINC01565O15544 149 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 UCHL1P09936 223 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 POU3F3P20264 500 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-201ENST00000309428 GJA4P35212 333 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 LIM2P55344 173 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 PUDPQ08623 228 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 MLLT11Q13015 90 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-201ENST00000309428 SLC9A5Q14940 896 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CST6Q15828 149 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 PIP5KL1Q5T9C9 394 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 MLIPQ5VWP3 458 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 OR4C6Q8NH72 309 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 SMPDL3AQ92484 453 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CCDC3Q9BQI4 270 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 BTBD1Q9H0C5 482 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CNOT2Q9NZN8 540 aaKnown RBP11.86□□□□□ -0.51
RETREG3-201ENST00000309428 TMEM5Q9Y2B1 443 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CEP250Q9BV73 2442 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 TRBV5-3A0A0A0MS03 114 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 HYKKA2RU49 373 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 B8ZZF3 427 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 H0YIV9 168 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 SLC22A5O76082 557 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 IL1AP01583 271 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 IFNA16P05015 189 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
RETREG3-201ENST00000309428 IRF4Q15306 451 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 STK11Q15831 433 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 CALHM3Q86XJ0 350 aa11.86□□□□□ -0.51
RETREG3-201ENST00000309428 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms