RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 C17orf67Q0P5P2 114 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 MRPL49Q13405 166 aaKnown RBP20.15■□□□□ 0.82
SNUPN-201ENST00000308588 SELPLGQ14242 412 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 GKAP1Q5VSY0 366 aaPredicted RBP20.15■□□□□ 0.82
SNUPN-201ENST00000308588 LRRC74BQ6ZQY2 392 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 FADS6Q8N9I5 356 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 GATSQ8NAP1 163 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 SLC38A5Q8WUX1 472 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 ZG16BQ96DA0 208 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 SLC39A3Q9BRY0 314 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 RUBCNLQ9H714 662 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 THUMPD1Q9NXG2 353 aaKnown RBP20.15■□□□□ 0.82
SNUPN-201ENST00000308588 P2RX2Q9UBL9 471 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 LIPGQ9Y5X9 500 aa20.15■□□□□ 0.82
SNUPN-201ENST00000308588 RP1L1Q8IWN7 2480 aaPredicted RBP20.15■□□□□ 0.82
SNUPN-201ENST00000308588 CENPVL1A0A0U1RR11 272 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ANKUB1A6NFN9 424 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 EVPLLA8MZ36 301 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 CBR3O75828 277 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 NPPAP01160 153 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 IGHG3P01860 377 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 HSF1Q00613 529 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 CD226Q15762 336 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ZNF141Q15928 474 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 GFRALQ6UXV0 394 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ATCAYQ86WG3 371 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 CHERPQ8IWX8 916 aaKnown RBP20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ZNF619Q8N2I2 560 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ZNF527Q8NB42 609 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 PCYOX1LQ8NBM8 494 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 MAL2Q969L2 176 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 LRRC58Q96CX6 371 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 RCN3Q96D15 328 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ACKR4Q9NPB9 350 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 CORO2BQ9UQ03 480 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 DTNAQ9Y4J8 743 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 ZGRF1Q86YA3 2104 aa20.14■□□□□ 0.81
SNUPN-201ENST00000308588 IGLV3-32A0A0A0MS00 114 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 CDC40O60508 579 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNUPN-201ENST00000308588 GNLYP22749 145 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 UQCRFS1P47985 274 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 MTPNP58546 118 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 MAPK14Q16539 360 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 PDZK1Q5T2W1 519 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 NANOGP8Q6NSW7 305 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 GHDCQ8N2G8 530 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 OR2M3Q8NG83 312 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 LRRC37BQ96QE4 947 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 THUMPD3Q9BV44 507 aaKnown RBP20.13■□□□□ 0.81
SNUPN-201ENST00000308588 DSN1Q9H410 356 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 NANOGQ9H9S0 305 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 A4GALTQ9NPC4 353 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 MED11Q9P086 117 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 ZNF407Q9C0G0 2248 aa20.13■□□□□ 0.81
SNUPN-201ENST00000308588 J3QKU1 62 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 ZNHIT1O43257 154 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 DCTN3O75935 186 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 HPNP05981 417 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 BCHEP06276 602 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 RNF144AP50876 292 aaPredicted RBP20.12■□□□□ 0.81
SNUPN-201ENST00000308588 HPCAP84074 193 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 FGD2Q7Z6J4 655 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 MISPQ8IVT2 679 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 TMEM19Q96HH6 336 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 QRSL1Q9H0R6 528 aaKnown RBP20.12■□□□□ 0.81
SNUPN-201ENST00000308588 FREM3P0C091 2139 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 RELNP78509 3460 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 A0A1B0GTH9 108 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 TRAPPC6AO75865 159 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 ADRM1Q16186 407 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 GCNT6Q5T4J0 391 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 TRILQ7L0X0 811 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 MTERF4Q7Z6M4 381 aaKnown RBP20.12■□□□□ 0.81
SNUPN-201ENST00000308588 ZNF614Q8N883 585 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 CCDC197Q8NCU1 140 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 OR4K17Q8NGC6 315 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 PHOSPHO1Q8TCT1 267 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 KAT8Q9H7Z6 458 aaKnown RBP20.12■□□□□ 0.81
SNUPN-201ENST00000308588 MTHFD2LQ9H903 347 aaPredicted RBP20.12■□□□□ 0.81
SNUPN-201ENST00000308588 GID8Q9NWU2 228 aa20.12■□□□□ 0.81
SNUPN-201ENST00000308588 PCNX3Q9H6A9 2034 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 POLEQ07864 2286 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 DNAJC13O75165 2243 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 A0A1B0GVC2 190 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 SERINC4A6NH21 518 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 ARAFP10398 606 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 PRDX6P30041 224 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 CRISP3P54108 245 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 TOMM20Q15388 145 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 EIPR1Q53HC9 387 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 HMGN2P46Q86SG4 172 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 FAM83FQ8NEG4 500 aaPredicted RBP20.11■□□□□ 0.81
SNUPN-201ENST00000308588 OIT3Q8WWZ8 545 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 CMTM5Q96DZ9 223 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 TREX2Q9BQ50 279 aaPredicted RBP20.11■□□□□ 0.81
SNUPN-201ENST00000308588 SLC6A15Q9H2J7 730 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 TMEM38AQ9H6F2 299 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 CALML5Q9NZT1 146 aa20.11■□□□□ 0.81
SNUPN-201ENST00000308588 DSPPQ9NZW4 1301 aa20.1■□□□□ 0.81
SNUPN-201ENST00000308588 TRGV5A0A0B4J1U4 118 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms