RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CHRFAM7AQ494W8 412 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CXorf57Q6NSI4 855 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 LINGO2Q7L985 606 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR5J2Q8NH18 312 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 UQCC2Q9BRT2 126 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 A0A1B0GTQ1 180 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HMX3A6NHT5 357 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 C1orf196B1AJZ1 125 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 MEN1O00255 615 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ORM1P02763 201 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HLA-DMAP28067 261 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PRSS3P35030 304 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OPRD1P41143 372 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 WDR4P57081 412 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 SORDQ00796 357 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PLA2G7Q13093 441 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CYP4V2Q6ZWL3 525 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 SMIM15Q7Z3B0 74 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GGHQ92820 318 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DVL3Q92997 716 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 CIB3Q96Q77 187 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 ZNF416Q9BWM5 594 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CUEDC1Q9NWM3 386 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FBXL4Q9UKA2 621 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3DA0A087WVF3 549 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3EA0A087X179 549 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3LB9A6J9 549 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HAS3O00219 553 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PMS2P2O95744 297 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3HP0C7X1 549 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CD1DP15813 335 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 MTNR1BP49286 362 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ATP5IP56385 69 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3CQ6IPX1 549 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D3Q8IZP1 549 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 ZNF619Q8N2I2 560 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TXNDC17Q9BRA2 123 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 MRPS7Q9Y2R9 242 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 SLC9B1P1A6NJY1 282 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 USP2O75604 605 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 PTHLHP12272 177 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PLA2G16P53816 162 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GRB2P62993 217 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 UGT8Q16880 541 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FAM151BQ6UXP7 276 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TAS1R3Q7RTX0 852 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 LRRN4Q8WUT4 740 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DCUN1D4Q92564 292 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 LPAR4Q99677 370 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RTL8AQ9BWD3 113 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ALDOBP05062 364 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GUSBP08236 651 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SOX18P35713 384 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PGDP52209 483 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 EPHA4P54764 986 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 DOC2BQ14184 412 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C17orf47Q8NEP4 570 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 OR2L2Q8NH16 312 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC41A2Q96JW4 573 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 OR1F2PQ96R84 312 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SSX3Q99909 188 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC38A1Q9H2H9 487 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CAPN10Q9HC96 672 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 A4GALTQ9NPC4 353 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C2orf42Q9NWW7 574 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC26A5P58743 744 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 EVX2Q03828 476 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 KCNAB2Q13303 367 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RNF130Q86XS8 419 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NEK7Q8TDX7 302 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ZNF486Q96H40 463 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 MRGPRX1Q96LB2 322 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TNKS2Q9H2K2 1166 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TVP23AA6NH52 213 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CTSHP09668 335 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SPTBP11277 2137 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CRHBPP24387 322 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GCGRP47871 477 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C22orf39Q6P5X5 142 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC51AQ86UW1 340 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 OR6K6Q8NGW6 343 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC30A3Q99726 388 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NIPSNAP3BQ9BS92 247 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RNF208Q9H0X6 261 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CHD3Q12873 2000 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 CXCL14O95715 111 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CALCRP30988 508 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HIST2H3PS2Q5TEC6 136 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ANKRD16Q6P6B7 361 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SMARCD3Q6STE5 483 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 XKR5Q6UX68 686 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 DPPA4Q7L190 304 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 DGLUCYQ7Z3D6 616 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PRSS58Q8IYP2 241 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 LNX2Q8N448 690 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CISD2Q8N5K1 135 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms