RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ECDO95905 644 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 S100GP29377 79 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 GPR85P60893 370 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 BTG2P78543 158 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 SYPL1Q16563 259 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF750Q32MQ0 723 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 Q6ZSR9 355 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 VTCN1Q7Z7D3 282 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF547Q8IVP9 402 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CA13Q8N1Q1 262 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 EID2BQ96D98 161 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 MUCL1Q96DR8 90 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 C16orf58Q96GQ5 468 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CCDC115Q96NT0 180 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ITPAQ9BY32 194 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 EVA1AQ9H8M9 152 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 COMMD3-BMI1R4GMX3 469 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 A0A1B0GVI7 797 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 EEF1E1-BLOC1S5C9J1V9 151 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 EEF1E1O43324 174 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 PRAMEF10O60809 474 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 PAPLNO95428 1278 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ETS2P15036 469 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 RHAGQ02094 409 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 MRPL28Q13084 256 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CPZQ66K79 652 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 BTN2A1Q7KYR7 527 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 PEG10Q86TG7 708 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 OR4K5Q8NGD3 323 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 OR1L3Q8NH93 324 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ENPP4Q9Y6X5 453 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 OXSR1O95747 527 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 WDPCPO95876 746 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 H2BFMP0C1H6 154 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 DBTP11182 482 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF585AQ6P3V2 769 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ARHGAP11AQ6P4F7 1023 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 FIP1L1Q6UN15 594 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 NDUFAF7Q7L592 441 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ERMP1Q7Z2K6 904 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 TCEANCQ8N8B7 351 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 AP3S1Q92572 193 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 NSMAFQ92636 917 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 SECISBP2Q96T21 854 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 DCUN1D5Q9BTE7 237 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 BCL2L14Q9BZR8 327 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 PSMD9O00233 223 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 FGF17O60258 216 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 MRPL33O75394 65 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF806P0C7X5 589 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 GGT1P19440 569 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 EIF1P41567 113 aaKnown RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CAPZA1P52907 286 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 PRPS1P60891 318 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 MALLQ13021 153 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 FAM71E1Q6IPT2 247 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 WDR74Q6RFH5 385 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 SERPINA11Q86U17 422 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 VASH2Q86V25 355 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ELP4Q96EB1 424 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 FRMD6Q96NE9 622 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 COQ7Q99807 217 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ENKD1Q9H0I2 346 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CHMP1AQ9HD42 196 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 P4HTMQ9NXG6 502 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 CTSFQ9UBX1 484 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 RAB26Q9ULW5 256 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF443Q9Y2A4 671 aaPredicted RBP8.63□□□□□ -1.03
PTPRE-202ENST00000306042 A0A1W2PR48 441 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 SERINC4A6NH21 518 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 EDNRAP25101 427 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 GGT2P36268 569 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 MLLT10P55197 1068 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 EIF4EBP2Q13542 120 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 DCTN2Q13561 401 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CCDC80Q76M96 950 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 ERI1Q8IV48 349 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 OR2T11Q8NH01 316 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 DDX31Q9H8H2 851 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 OR2A25A4D2G3 310 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 EME2A4GXA9 379 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CD79AP11912 226 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 MAGEA12P43365 314 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 STT3AP46977 705 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 DAP3P51398 398 aaKnown RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 SELENOWP63302 87 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 PIN1Q13526 163 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 RUNDC3AQ59EK9 446 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 ALG10Q5BKT4 473 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 PRAMEF17Q5VTA0 474 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CLDN23Q96B33 292 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 NODALQ96S42 347 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 PITX2Q99697 317 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 PARPBPQ9NWS1 579 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CMTM6Q9NX76 183 aa8.62□□□□□ -1.03
PTPRE-202ENST00000306042 CRNNQ9UBG3 495 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-202ENST00000306042 GLS2Q9UI32 602 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms