RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LDB3O75112 727 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 PAHP00439 452 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 P04436 131 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 ATXN1LP0C7T5 689 aaKnown RBP13.13□□□□□ -0.31
PRKCB-201ENST00000303531 PNMTP11086 282 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 IFNGR1P15260 489 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 ADRA1AP35348 466 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-201ENST00000303531 OR52E1Q8NGJ3 308 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 SLC25A18Q9H1K4 315 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 SC5DO75845 299 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 TIMP2P16035 220 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 TMEM150AQ86TG1 271 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 CDC6Q99741 560 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 DDX31Q9H8H2 851 aaKnown RBP13.13□□□□□ -0.31
PRKCB-201ENST00000303531 A0A1B0GV50 99 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 GGT3PA6NGU5 568 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 CEBPBP17676 345 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 S100A12P80511 92 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 CDK3Q00526 305 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
PRKCB-201ENST00000303531 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 CPXM2Q8N436 756 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF175Q9Y473 711 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 CRHBPP24387 322 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 AOAHP28039 575 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 PPA1Q15181 289 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 SLC14A2Q15849 920 aa13.13□□□□□ -0.31
PRKCB-201ENST00000303531 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 H3BML4 177 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 CNOT4O95628 575 aaKnown RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 TFP02787 698 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PRAMEF8Q5VWM4 474 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PRAMEF7Q5VXH5 474 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF480Q8WV37 535 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 ENTPD2Q9Y5L3 495 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 CSNK2A1P68400 391 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 CSNK2A3Q8NEV1 391 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 A0A0A6YYC8 382 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 MEGF11A6BM72 1044 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 I3L1I5 382 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PSMB10P40306 273 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PODNL1Q6PEZ8 512 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PHB2Q99623 299 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 A0A0J9YY10 115 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 ARPC5O15511 151 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 C1orf105O95561 183 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 S100PP25815 95 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 ECH1Q13011 328 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 TMPRSS11EQ9UL52 423 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 NUBP2Q9Y5Y2 271 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 RGS6P49758 472 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 CLDN2P57739 230 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 MPP7Q5T2T1 576 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-201ENST00000303531 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
PRKCB-201ENST00000303531 SLC22A5O76082 557 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 HOXB9P17482 250 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CRABP1P29762 137 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 RELAQ04206 551 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SF3A2Q15428 464 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 METTL11BQ5VVY1 283 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 TANKQ92844 425 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 KLHL42Q9P2K6 505 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SUSD2Q9UGT4 822 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 YARS2Q9Y2Z4 477 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 UBFD1O14562 309 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF217O75362 1048 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CRTAPO75718 401 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 UGT2B7P16662 529 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CAMLGP49069 296 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 WDR5P61964 334 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms